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RTP_02272018_0_2um_scaffold_1240

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_1240_1
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1..789
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFH4_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ01154.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
RTP_02272018_0_2um_scaffold_1240_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(886..3627)
DNA (2742bp) protein (914aa)
magnesium-transporting ATPase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B60
Magnesium-transporting ATPase MgtA {ECO:0000313|EMBL:GAO23397.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
magnesium ABC transporter ATPase
RTP_02272018_0_2um_scaffold_1240_3
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3885..5057
DNA (1173bp) protein (391aa)
FlhB flagellar biosynthetic protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZT0_JANMA
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:KIF82173.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
flhB; FlhB flagellar biosynthetic protein
RTP_02272018_0_2um_scaffold_1240_4
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5054..7135
DNA (2082bp) protein (694aa)
flagellar biosynthesis protein FlhA n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F851F5
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KIF82172.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
flhA; FlhA flagellar biosynthesis protein
RTP_02272018_0_2um_scaffold_1240_5
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7132..8397
DNA (1266bp) protein (422aa)
FlhF flagellar biosynthesis protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZS8_JANMA
flhF; flagellar biosynthesis regulator FlhF
FlhF flagellar biosynthesis protein {ECO:0000313|EMBL:ABR89179.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
RTP_02272018_0_2um_scaffold_1240_6
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8345..9169
DNA (825bp) protein (275aa)
Putative Antiactivator of flagellar biosynthesis FleN n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4P9_HERAR
MotR protein
Putative Antiactivator of flagellar biosynthesis FleN {ECO:0000313|EMBL:CAL61486.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
RTP_02272018_0_2um_scaffold_1240_7
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9173..9904
DNA (732bp) protein (244aa)
flagellar biosynthesis sigma factor n=1 Tax=Duganella zoogloeoides RepID=UPI000367A9C6
fliA; RNA polymerase sigma factor for flagellar operon
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
RTP_02272018_0_2um_scaffold_1240_8
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9886..10626
DNA (741bp) protein (247aa)
Flagellar motor protein MotA n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PFD0_9BURK
Flagellar motor protein MotA {ECO:0000313|EMBL:ELX10322.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
motA/TolQ/ExbB proton channel family protein
RTP_02272018_0_2um_scaffold_1240_9
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10636..11394
DNA (759bp) protein (253aa)
MotB chemotaxis protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZS4_JANMA
motB1; flagellar motor protein MotD
MotB chemotaxis protein {ECO:0000313|EMBL:ABR89137.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
RTP_02272018_0_2um_scaffold_1240_10
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11454..13034
DNA (1581bp) protein (527aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
DNA mismatch repair protein MutS n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035C2F11
DNA mismatch repair protein MutS domain-containing protein
RTP_02272018_0_2um_scaffold_1240_11
unknown

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13116..13238
DNA (123bp) protein (41aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_1240_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13235..14227)
DNA (993bp) protein (331aa)
Copper resistance protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGI1_9GAMM
Copper resistance protein {ECO:0000313|EMBL:EIL98572.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
copB; copper resistance protein B
RTP_02272018_0_2um_scaffold_1240_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14257..15132)
DNA (876bp) protein (292aa)
Copper resitance protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGI2_9GAMM
Copper resitance protein {ECO:0000313|EMBL:EIL98573.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
copA; copper resitance protein
RTP_02272018_0_2um_scaffold_1240_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15092..15931)
DNA (840bp) protein (280aa)
Copper resistance protein A 2 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HH94_ACHXA
copper resistance protein A
Copper resistance protein A 2 {ECO:0000313|EMBL:ADP19044.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
RTP_02272018_0_2um_scaffold_1240_15
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16217..17071)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDG9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX64603.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Lead, cadmium, zinc and mercury transporting ATPase
Displaying 15 items

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