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RTP_02272018_0_2um_scaffold_1282

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_1282_1
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..279
DNA (279bp) protein (93aa)
FAD dependent oxidoreductase n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DQ62_METS0
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADI29433.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
RTP_02272018_0_2um_scaffold_1282_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(301..1800)
DNA (1500bp) protein (500aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK3_HALNC
GntR family transcriptional regulator
Transcriptional regulator, GntR family with aminotransferase domain {ECO:0000313|EMBL:ACX97191.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
RTP_02272018_0_2um_scaffold_1282_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2068..2844
DNA (777bp) protein (259aa)
gamma-glutamyl-gamma-aminobutyrate hydrolase (EC:3.5.1.94)
Gamma-glutamyl-gamma-aminobutyrate hydrolase {ECO:0000313|EMBL:ACX97190.1}; EC=3.5.1.94 {ECO:0000313|EMBL:ACX97190.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Gamma-glutamyl-gamma-aminobutyrate hydrolase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK2_HALNC
RTP_02272018_0_2um_scaffold_1282_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2871..4241
DNA (1371bp) protein (457aa)
glutamate--putrescine ligase (EC:6.3.1.11)
Glutamate--putrescine ligase {ECO:0000313|EMBL:ACX97189.1}; EC=6.3.1.11 {ECO:0000313|EMBL:ACX97189.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Glutamate--putrescine ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK1_HALNC
RTP_02272018_0_2um_scaffold_1282_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4298..5689
DNA (1392bp) protein (464aa)
Aminotransferase class-III n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXK0_HALNC
class III aminotransferase
Aminotransferase class-III {ECO:0000313|EMBL:ACX97188.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
RTP_02272018_0_2um_scaffold_1282_6
unknown

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5686..5811
DNA (126bp) protein (42aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_1282_7
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5822..6943
DNA (1122bp) protein (374aa)
Putrescine-binding periplasmic protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DQ78_METS0
family 1 extracellular solute-binding protein
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
RTP_02272018_0_2um_scaffold_1282_8
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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7038..8153
DNA (1116bp) protein (372aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DQ79_METS0
spermidine/putrescine ABC transporter ATPase
RTP_02272018_0_2um_scaffold_1282_9
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8150..9061
DNA (912bp) protein (304aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DQ80_METS0
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADI29451.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
RTP_02272018_0_2um_scaffold_1282_10
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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9058..9897
DNA (840bp) protein (280aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DQ81_METS0
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADI29452.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
RTP_02272018_0_2um_scaffold_1282_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9920..11380
DNA (1461bp) protein (487aa)
succinate-semialdehyde dehydrogenase (EC:1.2.1.24)
Succinic semialdehyde dehydrogenase {ECO:0000313|EMBL:ACX97182.1}; EC=1.2.1.24 {ECO:0000313|EMBL:ACX97182.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Succinic semialdehyde dehydrogenase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX62_HALNC
RTP_02272018_0_2um_scaffold_1282_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11453..12940
DNA (1488bp) protein (496aa)
betaine aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:ACX97181.1}; EC=1.2.1.8 {ECO:0000313|EMBL:ACX97181.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Betaine-aldehyde dehydrogenase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX61_HALNC
RTP_02272018_0_2um_scaffold_1282_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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12956..14242
DNA (1287bp) protein (429aa)
4-aminobutyrate aminotransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX60_HALNC
4-aminobutyrate aminotransferase
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ACX97180.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
RTP_02272018_0_2um_scaffold_1282_14

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comp(14458..14643)
DNA (186bp) protein (62aa)
Putative outer membrane protein OmpA (Modular protein) n=1 Tax=mine drainage metagenome RepID=E6QPU7_9ZZZZ
Putative outer membrane protein OmpA (Modular protein) {ECO:0000313|EMBL:CBI09268.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Outer membrane protein A precursor
Displaying 14 items

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