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RTP_02272018_0_2um_scaffold_1332

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_1332_1

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1..462
DNA (462bp) protein (154aa)
Putative SAM-dependent methyltransferase n=1 Tax=mine drainage metagenome RepID=E6QSK6_9ZZZZ
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:CBI10228.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_1332_2

Not on your lists

455..946
DNA (492bp) protein (164aa)
Phosphopantetheine adenylyltransferase (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase) {ECO:0000313|EMBL:CBI10229.1}; EC=2.7.7.3 {ECO:0000313|EMBL:CBI10229.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase) n=1 Tax=mine drainage metagenome RepID=E6QSK7_9ZZZZ
RTP_02272018_0_2um_scaffold_1332_3

Not on your lists

957..1202
DNA (246bp) protein (82aa)
Ferredoxin n=1 Tax=mine drainage metagenome RepID=E6QSE9_9ZZZZ
Ferredoxin {ECO:0000313|EMBL:CBI10171.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
4Fe-4S ferredoxin
RTP_02272018_0_2um_scaffold_1332_4
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1355..1981)
DNA (627bp) protein (209aa)
carboxylesterase (EC:3.1.1.1)
Carboxylesterase {ECO:0000313|EMBL:ADI29003.1}; EC=3.1.1.1 {ECO:0000313|EMBL:ADI29003.1};; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versatilis (strain 301).;"
Carboxylesterase n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DN64_METS0
RTP_02272018_0_2um_scaffold_1332_5
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1974..2465)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALM2T RepID=UPI00037BFBC1
Uncharacterized protein {ECO:0000313|EMBL:KFZ90609.1}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_1332_6
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2696..4525)
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003808D6A
sensory box protein
Sensory box protein {ECO:0000313|EMBL:ACL74244.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
RTP_02272018_0_2um_scaffold_1332_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4715..6442
DNA (1728bp) protein (576aa)
Putative Type II secretory pathway component PulD n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLB3_THIDA
Type II secretory pathway component PulD
Putative Type II secretory pathway component PulD {ECO:0000313|EMBL:AAZ96502.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_1332_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6453..8108
DNA (1656bp) protein (552aa)
ATPase, type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB id=12497739 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ATPase, type IV pilus assembly protein PilB
ATPase, type IV pilus assembly protein PilB {ECO:0000313|EMBL:AAZ96500.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_02272018_0_2um_scaffold_1332_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8112..9305
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DED40
type IV pilus assembly protein PilC
Tax=GWE1_Thiobacillus_62_9_curated
RTP_02272018_0_2um_scaffold_1332_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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9302..10573
DNA (1272bp) protein (424aa)
monoheme cytochrome SoxX id=12497741 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
monoheme cytochrome SoxX
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_02272018_0_2um_scaffold_1332_11
unknown

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10570..11100
DNA (531bp) protein (177aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_1332_12
unknown

Not on your lists

11097..11492
DNA (396bp) protein (132aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_1332_13
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11512..12396
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00037C1207
Uncharacterized protein {ECO:0000313|EMBL:EXI65219.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
conserved hypothetical protein, membrane or secreted
RTP_02272018_0_2um_scaffold_1332_14
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12431..13105
DNA (675bp) protein (225aa)
General secretion pathway protein H n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AI9_DECAR
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
RTP_02272018_0_2um_scaffold_1332_15
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13106..14035
DNA (930bp) protein (310aa)
Putative signal peptide protein n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UGP1_RALSL
putative signal peptide protein
Putative signal peptide protein {ECO:0000313|EMBL:AGH85558.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
RTP_02272018_0_2um_scaffold_1332_16
unknown

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13998..14270
DNA (273bp) protein (91aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_1332_17
unknown

Not on your lists

14316..14435
DNA (120bp) protein (40aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_1332_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14425..15057
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CA8C4
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_02272018_0_2um_scaffold_1332_19
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15062..16285)
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRZ1_SIDLE
hypothetical protein
Tax=CG_Beta_01
RTP_02272018_0_2um_scaffold_1332_20
CG_Gallio_01, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16282..16977)
DNA (696bp) protein (232aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QG95_AZOSU
antimicrobial peptide ABC transporter ATPase
Tax=CG_Gallio_01
RTP_02272018_0_2um_scaffold_1332_21
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16980..18125)
DNA (1146bp) protein (382aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRY9_SIDLE
efflux transporter, RND family, MFP subunit
Tax=CG_Beta_01
RTP_02272018_0_2um_scaffold_1332_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18122..18475)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W866_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42294.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_1332_23
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18510..19886)
DNA (1377bp) protein (459aa)
Outer membrane efflux protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GW0_DECAR
Outer membrane efflux protein
Tax=CG_Beta_01
RTP_02272018_0_2um_scaffold_1332_24
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19920..20738
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003783F3B
Formamidopyrimidine-DNA glycosylase
Tax=GWA2_Gallionellales_60_142_curated
RTP_02272018_0_2um_scaffold_1332_25

Not on your lists

20808..22769
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QWY8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11762.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_1332_26

Not on your lists

comp(22899..24872)
DNA (1974bp) protein (658aa)
Putative glutathione-regulated potassium-efflux system protein kefB (K(+)/H(+) antiporter) (NEM-activable K(+)/H(+) antiporter) KefB-like n=1 Tax=mine drainage metagenome RepID=E6QSF0_9ZZZZ
Putative glutathione-regulated potassium-efflux system protein kefB (K(+)/H(+) antiporter) (NEM-activable K(+)/H(+) antiporter) KefB-like {ECO:0000313|EMBL:CBI10172.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
potassium efflux system protein
RTP_02272018_0_2um_scaffold_1332_27

Not on your lists

24974..25969
DNA (996bp) protein (332aa)
Arabinose 5-phosphate isomerase {ECO:0000313|EMBL:CBI10173.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CBI10173.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Arabinose 5-phosphate isomerase n=1 Tax=mine drainage metagenome RepID=E6QSF1_9ZZZZ
capsule expression protein KpsF/GutQ
RTP_02272018_0_2um_scaffold_1332_28
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25973..26497
DNA (525bp) protein (175aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (EC:3.1.3.45)
Putative 3-Deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P phosphatase) kdsC-like n=1 Tax=mine drainage metagenome RepID=E6QSF2_9ZZZZ
Tax=CG_Beta_01
RTP_02272018_0_2um_scaffold_1332_29

Not on your lists

26494..27066
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QSF3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10175.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_1332_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27050..27646
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037225EE
OstA-like family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying items 1-30 of 31 in total

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