ggKbase home page

RTP_02272018_0_2um_scaffold_2604

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_02272018_0_2um_scaffold_2604_1
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..362)
DNA (360bp) protein (120aa)
Protein tyrosine phosphatase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B606_9PROT
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:BAN35957.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_02272018_0_2um_scaffold_2604_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(461..808)
DNA (348bp) protein (116aa)
Regulatory protein, ArsR n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAJ4_9PROT
ArsR family transcriptional regulator {ECO:0000313|EMBL:GAO35387.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
regulatory protein, ArsR
RTP_02272018_0_2um_scaffold_2604_3

Not on your lists

comp(808..1167)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQP6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI09567.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_2604_4

Not on your lists

comp(1170..1910)
DNA (741bp) protein (247aa)
Putative Glutamine amidotransferase / GMP synthase n=1 Tax=mine drainage metagenome RepID=E6QQP5_9ZZZZ
Putative Glutamine amidotransferase / GMP synthase {ECO:0000313|EMBL:CBI09566.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GMP synthase
RTP_02272018_0_2um_scaffold_2604_5
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1927..2820)
DNA (894bp) protein (298aa)
Transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA83_9PROT
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO36338.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
transcriptional regulator
RTP_02272018_0_2um_scaffold_2604_6

Not on your lists

2895..3452
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QQP4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI09565.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_02272018_0_2um_scaffold_2604_7

Not on your lists

3459..4685
DNA (1227bp) protein (409aa)
Major facilitator superfamily (MFS_1) transporter n=1 Tax=mine drainage metagenome RepID=E6QQP3_9ZZZZ
Major facilitator superfamily (MFS_1) transporter {ECO:0000313|EMBL:CBI09564.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
major facilitator superfamily protein
RTP_02272018_0_2um_scaffold_2604_8

Not on your lists

4678..6633
DNA (1956bp) protein (652aa)
Putative Rad3-related DNA helicase n=1 Tax=mine drainage metagenome RepID=E6QQP2_9ZZZZ
Putative Rad3-related DNA helicase {ECO:0000313|EMBL:CBI09563.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
helicase c2
RTP_02272018_0_2um_scaffold_2604_9
unknown

Not on your lists

6630..6761
DNA (132bp) protein (44aa)

This feature has no annotations

RTP_02272018_0_2um_scaffold_2604_10

Not on your lists

comp(6712..7008)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QWD0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11553.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 10 items

View Taxonomy