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RTP_03222018_0_1um_scaffold_299

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_1um_scaffold_299_1
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139..456)
DNA (318bp) protein (106aa)
Nitrogen regulatory protein P-II n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DKJ8_9GAMM
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:AHE98912.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
RTP_03222018_0_1um_scaffold_299_2
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(486..1466)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U707_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV20033.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein
RTP_03222018_0_1um_scaffold_299_3
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1645..2472)
DNA (828bp) protein (276aa)
putative Trypsin-like serine protease id=12496267 bin=THIO_MID species=Thiomonas arsenitoxydans genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05232.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
RTP_03222018_0_1um_scaffold_299_4
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2484..4622)
DNA (2139bp) protein (713aa)
sulfate transporter id=12496266 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Sulfate transporter {ECO:0000313|EMBL:GAO37669.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
sulfate transporter
RTP_03222018_0_1um_scaffold_299_5
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4727..5872
DNA (1146bp) protein (382aa)
hypothetical protein id=12496265 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EGW55297.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
hypothetical protein
RTP_03222018_0_1um_scaffold_299_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6078..7376
DNA (1299bp) protein (433aa)
Chromate transporter id=1359640 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
chromate transporter
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_299_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7384..7809
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003808155
rhodanese-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_1um_scaffold_299_8
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7806..8282
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000380E0D2
Chromate resistance exported protein
Tax=RBG_16_Gamma2_64_10_curated
RTP_03222018_0_1um_scaffold_299_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8346..8678
DNA (333bp) protein (111aa)
sulfur transfer protein TusE n=1 Tax=Thiobacillus thioparus RepID=UPI00037A06D9
DsrC -like protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_299_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8784..9278
DNA (495bp) protein (165aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFJ5_THIDA
RTP_03222018_0_1um_scaffold_299_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9268..10404
DNA (1137bp) protein (379aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit id=1351677 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_299_12
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11290..11550)
DNA (261bp) protein (87aa)
Nitrogen regulatory protein P-II n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEB6_GALCS
nitrogen regulatory protein P-II
Tax=GWA2_Gallionellales_54_124_curated
RTP_03222018_0_1um_scaffold_299_13
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11607..14696)
DNA (3090bp) protein (1030aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEB5_GALCS
CzcA family heavy metal efflux pump
Tax=GWA2_Gallionellales_54_124_curated
RTP_03222018_0_1um_scaffold_299_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14706..15893)
DNA (1188bp) protein (396aa)
Efflux transporter, RND family, MFP subunit id=1332410 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RND family efflux transporter MFP subunit
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_299_15
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15903..17222)
DNA (1320bp) protein (440aa)
Outer membrane efflux protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIM8_GALCS
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADL56191.1}; Flags: Precursor;; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
RTP_03222018_0_1um_scaffold_299_16
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17310..17660)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIM9_GALCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL56192.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
RTP_03222018_0_1um_scaffold_299_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17719..17970)
DNA (252bp) protein (84aa)
Putative uncharacterized protein id=1332413 bin=GWE1_T_denit_62_9 species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_299_18
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(18057..18698)
DNA (642bp) protein (214aa)
Cation efflux family protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2E9G3_9BACT
cation efflux family protein
Tax=RBG_16_Chloroflexi_51_9_curated
RTP_03222018_0_1um_scaffold_299_19
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18739..19230)
DNA (492bp) protein (164aa)
Redoxin domain protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EKA5_ACIF5
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ACH82465.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
RTP_03222018_0_1um_scaffold_299_20
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19232..19921)
DNA (690bp) protein (230aa)
ABC transporter related n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EKA4_ACIF5
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACH82464.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
RTP_03222018_0_1um_scaffold_299_21
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19914..21077)
DNA (1164bp) protein (388aa)
Putative ABC transporter, permease protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASH3_METEA
ABC transporter permease
Putative ABC transporter, permease protein {ECO:0000313|EMBL:ACS40414.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
RTP_03222018_0_1um_scaffold_299_22
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21074..21574)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASH2_METEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS40413.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
RTP_03222018_0_1um_scaffold_299_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21636..22787)
DNA (1152bp) protein (384aa)
tetrahydromethanopterin S-methyltransferase subunit A (EC:2.1.1.86)
Tetrahydromethanopterin S-methyltransferase, subunit A n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DR4_DECAR
Tetrahydromethanopterin S-methyltransferase, subunit A {ECO:0000313|EMBL:AAZ47017.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
RTP_03222018_0_1um_scaffold_299_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22784..23182)
DNA (399bp) protein (133aa)
Transcriptional regulator, ArsR family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DR3_DECAR
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AAZ47018.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
RTP_03222018_0_1um_scaffold_299_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23343..23555)
DNA (213bp) protein (71aa)
Uncharacterized protein id=1332416 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rhodanese-like protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_1um_scaffold_299_26
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23693..24307)
DNA (615bp) protein (205aa)
Cation efflux protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MH9_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KFL37878.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
cation efflux protein
RTP_03222018_0_1um_scaffold_299_27
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24304..24438)
DNA (135bp) protein (45aa)
CzcA family heavy metal efflux pump n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7V8P1_STEMA
Cation transporter {ECO:0000313|EMBL:KGM56813.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
heavy metal efflux pump CzcA family
RTP_03222018_0_1um_scaffold_299_28
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24447..27626)
DNA (3180bp) protein (1060aa)
cation transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003699D2E
CzcA family heavy metal efflux pump
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ADL54962.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
RTP_03222018_0_1um_scaffold_299_29
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27641..27982)
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI5_GALCS
nitrogen regulatory protein P-II
Tax=GWA2_Rhodocyclales_65_20_curated
RTP_03222018_0_1um_scaffold_299_30
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27992..29527)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A868C
secretion protein HlyD
Tax=BJP_08E140C01_Dechloromonas_61_78
Displaying items 1-30 of 73 in total

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