name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_03222018_0_1um_scaffold_1242_1
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..1066)
|
hypothetical protein, partial n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B19E8
methyl-accepting chemotaxis sensory transducer
Tax=RBG_16_Betaproteobacteria_56_24_curated
|
|
RTP_03222018_0_1um_scaffold_1242_2
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1372..3072)
|
Chemotaxis sensory transducer n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIF3_THIDA
methyl-accepting chemotaxis sensory transducer
Tax=RBG_16_Betaproteobacteria_56_24_curated
|
|
RTP_03222018_0_1um_scaffold_1242_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3123..3617)
|
purine-binding chemotaxis protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000366DA2B
chemotaxis protein CheW
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_1242_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3674..5710)
|
signal transduction histidine kinase CheA-like protein; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] id=12493525 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
signal transduction histidine kinase CheA-like protein
|
|
RTP_03222018_0_1um_scaffold_1242_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5755..6072)
|
chemotaxis protein CheY n=1 Tax=Thiobacillus denitrificans RepID=UPI0003695FB7
response regulator receiver domain-containing protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_1242_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6179..6739)
|
Putative uncharacterized protein id=1344989 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_1242_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6748..7650)
|
Flagellin, flagellar hook-associated protein 3 FlgL n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIE8_THIDA
flgL; flagellar hook-associated protein FlgL
Flagellin, flagellar hook-associated protein 3 FlgL {ECO:0000313|EMBL:AAZ97580.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_1um_scaffold_1242_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7663..9303)
|
Flagellar hook-associated protein id=1344991 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flgK; flagellar hook-associated protein FlgK
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_1242_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9393..10349)
|
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase id=1344992 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_1242_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10349..11446)
|
Flagellar P-ring protein id=1344993 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flgI; flagellar basal body P-ring biosynthesis protein FlgA
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_1242_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11458..12027)
|
Flagellar L-ring protein id=1344994 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar L-ring protein FlgH
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_1242_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12055..12837)
|
flagellar basal body rod protein FlgG n=1 Tax=Thiobacillus denitrificans RepID=UPI000378F852
flagellar basal body rod protein FlgG
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:AAZ97585.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_1um_scaffold_1242_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12864..13607)
|
flagellar basal body rod protein FlgF n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FD335
flgF; flagellar basal body rod protein FlgF
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_1242_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13640..14845)
|
Flagellar hook protein FlgE n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIE1_THIDA
flgE; flagellar hook protein FlgE
Flagellar hook protein FlgE {ECO:0000313|EMBL:AAZ97587.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_1um_scaffold_1242_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14902..15567)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBA3E
flgD; flagellar basal body rod modification protein
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:AAZ97588.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_03222018_0_1um_scaffold_1242_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15596..16000)
|
Flagellar basal-body rod protein FlgC id=1359589 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar basal body rod protein FlgC
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_1242_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16025..16432)
|
Flagellar basal body rod protein FlgB id=1359590 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flagellar basal-body rod protein FlgB
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_1242_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16616..17329
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036511CB
flgA; flagellar basal body P-ring biosynthesis protein FlgA
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_1242_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17428..17724
|
Putative Anti-Sigma-28 factor, FlgM id=1359592 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
anti-sigma-28 factor, FlgM
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_03222018_0_1um_scaffold_1242_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17711..18106
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036260D3
flagella synthesis protein FlgN
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_1242_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18140..19972)
|
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; tRNA (mnm(5)s(2)U34)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=2.1.1.61 {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; FAD-dependent cmnm(5)s(2)U34 oxidoreductase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=1.5.-.- {ECO:0000255|HAMAP-Rule:MF_01102};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
FAD-dependent cmnm(5)s(2)U34 oxidoreductase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037927C2
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase
|
|
RTP_03222018_0_1um_scaffold_1242_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20005..21174
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360E6B1
secretion protein HlyD
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_1242_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21171..21842
|
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI00035E0465
ABC transporter-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_1242_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21839..23041
|
peptide ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI00036B9511
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_1242_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23038..24237
|
peptide ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI0003623CEB
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_03222018_0_1um_scaffold_1242_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24658..25038
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000366BAA3
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_03222018_0_1um_scaffold_1242_27
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25206..27626
|
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
Multi-sensor hybrid histidine kinase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E640_9GAMM
signal transduction histidine kinase
|
|
RTP_03222018_0_1um_scaffold_1242_28
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27628..28557
|
Two-component response regulator with diguanylate cyclase domain n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2W9_AZOL4
Two-component response regulator with diguanylate cyclase domain
Two-component response regulator with diguanylate cyclase domain {ECO:0000313|EMBL:CBS87717.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
|
|
RTP_03222018_0_1um_scaffold_1242_29
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28576..29664
|
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI000368AA67
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG02095.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
|
|
RTP_03222018_0_1um_scaffold_1242_30
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29743..31083
|
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AE5_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ48186.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
|