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RTP_03222018_0_2um_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_161_1
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

229..1056
DNA (828bp) protein (276aa)
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RTP_03222018_0_2um_scaffold_161_2
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(940..1224)
DNA (285bp) protein (95aa)
HigA family addiction module antidote protein
HigA family addiction module antidote protein {ECO:0000313|EMBL:BAO29204.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
Plasmid maintenance system antidote protein, XRE family id=4527441 bin=GWC2_Methylomirabilis_70_16 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RTP_03222018_0_2um_scaffold_161_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1401..1985
DNA (585bp) protein (195aa)
Putative uncharacterized protein id=1362507 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_161_4
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2123..2776)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BNU6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFB72163.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_161_5
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2779..4008)
DNA (1230bp) protein (410aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens WH6 RepID=E2XXM8_PSEFL
Putative ATPase {ECO:0000313|EMBL:KFB72162.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
ATPase
RTP_03222018_0_2um_scaffold_161_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4092..5219)
DNA (1128bp) protein (376aa)
deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI0003778481
deoxyguanosinetriphosphate triphosphohydrolase-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_161_7
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5216..6412)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368E622
hipA; cell division protein HipA
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
RTP_03222018_0_2um_scaffold_161_8
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6409..6723)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z5M7_9GAMM
hypothetical protein
Tax=GWD2_Desulfuromonadales_61_12_curated
RTP_03222018_0_2um_scaffold_161_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6784..7968)
DNA (1185bp) protein (395aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036AA883
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_161_10
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7997..8404
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003729850
predicted nucleotidyltransferase
Tax=RBG_16_Gamma2_64_11_curated
RTP_03222018_0_2um_scaffold_161_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8426..9394
DNA (969bp) protein (323aa)
Glycosyl transferase family 2 id=1318107 bin=GWE1_T_denit_62_9 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
family 2 glycosyl transferase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_161_12
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9502..10320
DNA (819bp) protein (273aa)
ABC-type polysaccharide/polyol phosphate export systems permease n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADW9_9PROT
ABC-type polysaccharide/polyol phosphate export systems permease
Tax=RBG_16_Gallionellales_57_15_curated
RTP_03222018_0_2um_scaffold_161_13
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10638..10955
DNA (318bp) protein (106aa)
DNA polymerase beta domain protein region n=1 Tax=Thiocapsa marina 5811 RepID=F9U6D0_9GAMM
DNA polymerase III subunit beta {ECO:0000313|EMBL:GAO34808.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
DNA polymerase beta domain-containing protein
RTP_03222018_0_2um_scaffold_161_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10986..11219
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U6C9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAO34807.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_161_15
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11229..11501
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000362C7B5
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_161_16
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11488..11799
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002FB80D7
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_161_17
unknown

Not on your lists

11819..12013
DNA (195bp) protein (65aa)

This feature has no annotations

RTP_03222018_0_2um_scaffold_161_18
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12025..12315
DNA (291bp) protein (97aa)
DNA polymerase beta domain protein region n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A0F3_METMM
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AEG02459.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
RTP_03222018_0_2um_scaffold_161_19
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12312..12680
DNA (369bp) protein (123aa)
Putative uncharacterized protein id=4723251 bin=GWC2_Deltaproteobacteria_66_88 species=Methylomonas methanica genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWA2_Gallionellales_59_43_curated
RTP_03222018_0_2um_scaffold_161_20
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12727..13017
DNA (291bp) protein (97aa)
Polysaccharide/polyol phosphate ABC transporter ATPase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B8Y4_9PROT
polysaccharide/polyol phosphate ABC transporter ATPase
Tax=RBG_16_Gallionellales_57_15_curated
RTP_03222018_0_2um_scaffold_161_21
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13077..13319
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ40_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RTP_03222018_0_2um_scaffold_161_22
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13338..13571
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034CC1E9
Putative addiction module component
Tax=RBG_16_Betaproteobacteria_56_24_curated
RTP_03222018_0_2um_scaffold_161_23
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13568..13897
DNA (330bp) protein (110aa)
Plasmid stabilization system protein, RelE/ParE family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VZQ7_9CYAN
Plasmid stabilization system protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
RTP_03222018_0_2um_scaffold_161_24
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14007..14297
DNA (291bp) protein (97aa)
Polysaccharide/polyol phosphate ABC transporter ATPase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B8Y4_9PROT
polysaccharide/polyol phosphate ABC transporter ATPase
Tax=RBG_16_Gallionellales_57_15_curated
RTP_03222018_0_2um_scaffold_161_25
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14544..14834
DNA (291bp) protein (97aa)
DNA polymerase beta-like domain {ECO:0000313|EMBL:CCD28829.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CCD28829.1};; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" source="Candidatus Glomeribacter gigasporarum BEG34.;"
DNA polymerase beta-like domain n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2J7T4_9BURK
DNA polymerase beta domain-containing protein
RTP_03222018_0_2um_scaffold_161_26
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14831..15211
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Methylobacter sp. UW 659-2-H10 RepID=UPI0003708D60
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER56153.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
RTP_03222018_0_2um_scaffold_161_27
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15355..15660
DNA (306bp) protein (102aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YFU4_THIV6
polysaccharide/polyol phosphate ABC transporter ATPase
Tax=RBG_16_Gallionellales_57_15_curated
RTP_03222018_0_2um_scaffold_161_28
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15667..16221
DNA (555bp) protein (185aa)
ORF6N domain-containing protein id=4718895 bin=GWC2_Nitrospirae_57_13 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
RTP_03222018_0_2um_scaffold_161_29
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16247..17557
DNA (1311bp) protein (437aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YFU4_THIV6
polysaccharide/polyol phosphate ABC transporter ATPase
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:AFL75862.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
RTP_03222018_0_2um_scaffold_161_30
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17672..18619
DNA (948bp) protein (316aa)
Methyltransferase FkbM family n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T8I1_BURSG
FkbM family methyltransferase
Methyltransferase FkbM family {ECO:0000313|EMBL:ADN56572.1}; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
Displaying items 1-30 of 178 in total

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