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RTP_03222018_0_2um_scaffold_212

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_212_1
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..258
DNA (258bp) protein (86aa)
hemin transport protein HemS; K07225 putative hemin transport protein id=12496898 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hemin-degrading HemS.ChuX domain protein
Hemin-degrading HemS.ChuX domain protein {ECO:0000313|EMBL:AIO68474.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
RTP_03222018_0_2um_scaffold_212_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258..617
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F0B8A
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

610..1959
DNA (1350bp) protein (450aa)
Putative uncharacterized protein id=1341272 bin=GWE1_T_denit_62_9 species=Nitrosomonas eutropha genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1969..3186
DNA (1218bp) protein (406aa)
Cytochrome c, class I n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKU6_THIDA
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:AAZ96676.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_212_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3183..3887
DNA (705bp) protein (235aa)
Cytochrome c, class I id=1334551 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome c, class I
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3980..6010
DNA (2031bp) protein (677aa)
TonB-dependent siderophore receptor id=1334553 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TonB-dependent siderophore receptor
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6022..7230
DNA (1209bp) protein (403aa)
Putative uncharacterized protein id=1334554 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7227..9083
DNA (1857bp) protein (619aa)
Putative uncharacterized protein id=1334555 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9080..10255
DNA (1176bp) protein (392aa)
Transport protein id=1334556 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transport protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10270..12111
DNA (1842bp) protein (614aa)
Iron transporter id=1334557 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
iron transporter
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12102..13196
DNA (1095bp) protein (365aa)
diaminopimelate decarboxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036C41A9
diaminopimelate decarboxylase
Diaminopimelate decarboxylase {ECO:0000313|EMBL:AAZ96670.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_212_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13175..13939
DNA (765bp) protein (255aa)
Putative aldolase id=1317134 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
aldolase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13936..15057
DNA (1122bp) protein (374aa)
Putative uncharacterized protein id=1317133 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15237..15983
DNA (747bp) protein (249aa)
Periplasmic protein TonB id=1317132 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
periplasmic protein TonB
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16414..16836
DNA (423bp) protein (141aa)
Putative biopolymer transport protein id=1349955 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
biopolymer transport protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16935..17780
DNA (846bp) protein (282aa)
TonB-dependent siderophore receptor id=1317129 bin=GWE1_T_denit_62_9 species=Thioalkalimicrobium aerophilum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane iron(III) dicitrate receptor
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17777..18727
DNA (951bp) protein (317aa)
TonB-dependent siderophore receptor id=1317129 bin=GWE1_T_denit_62_9 species=Thioalkalimicrobium aerophilum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane iron(III) dicitrate receptor
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_18
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18703..18819
DNA (117bp) protein (39aa)
TonB-dependent siderophore receptor id=1317129 bin=GWE1_T_denit_62_9 species=Thioalkalimicrobium aerophilum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane iron(III) dicitrate receptor
Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
RTP_03222018_0_2um_scaffold_212_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19221..19337
DNA (117bp) protein (39aa)
bacterioferritin-associated ferredoxin; K02192 bacterioferritin-associated ferredoxin id=12497952 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
bacterioferritin-associated ferredoxin
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_212_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19513..19992
DNA (480bp) protein (160aa)
bacterioferritin; K03594 bacterioferritin id=12497953 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
bacterioferritin
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_212_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20151..20879
DNA (729bp) protein (243aa)
Periplasmic protein TonB id=1317132 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
periplasmic protein TonB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_212_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20882..21628
DNA (747bp) protein (249aa)
flagellar motor protein MotA n=1 Tax=Thiobacillus denitrificans RepID=UPI000372CEAE
MotA/TolQ/ExbB proton channel family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_212_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21628..22056
DNA (429bp) protein (143aa)
biopolymer transporter ExbD n=1 Tax=Thiobacillus denitrificans RepID=UPI0003653113
biopolymer transport protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_212_24
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22084..24240
DNA (2157bp) protein (719aa)
putative TonB-denpendent receptor; K02014 iron complex outermembrane recepter protein id=12497352 bin=THIO_MID species=Thauera sp. 27 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative TonB-denpendent receptor
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
RTP_03222018_0_2um_scaffold_212_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24237..24884
DNA (648bp) protein (216aa)
Putative uncharacterized protein id=1349958 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_212_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24887..25072
DNA (186bp) protein (62aa)
4-oxalocrotonate tautomerase n=1 Tax=Thiobacillus thioparus RepID=UPI00037C7292
isomerase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_212_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25076..26872
DNA (1797bp) protein (599aa)
excinuclease ABC subunit C n=1 Tax=Thiobacillus thioparus RepID=UPI00036779C0
excinuclease ABC subunit C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_212_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26872..27441
DNA (570bp) protein (190aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003697E51
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_212_trna_1
unknown

Not on your lists

27491..27563
DNA (73bp)
transferRNA Gly
RTP_03222018_0_2um_scaffold_212_trna_2
unknown

Not on your lists

27636..27706
DNA (71bp)
transferRNA Cys
Displaying items 1-30 of 80 in total

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