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RTP_03222018_0_2um_scaffold_749

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Displaying items 1-30 of 217 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_749_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..245
DNA (243bp) protein (81aa)
Putative uncharacterized protein id=1320217 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_749_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

242..1198
DNA (957bp) protein (319aa)
succinylglutamate desuccinylase n=1 Tax=Thiobacillus thioparus RepID=UPI000362733F
succinylglutamate desuccinylase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_749_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1200..2090)
DNA (891bp) protein (297aa)
tyrosine recombinase XerD n=1 Tax=Thiobacillus thioparus RepID=UPI000380E9BF
tyrosine recombinase XerD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_749_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2087..2569)
DNA (483bp) protein (161aa)
methylated-DNA-(protein)-cysteine S-methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] id=12493273 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
methylated-DNA-(protein)-cysteine S-methyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_749_5
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2665..2949
DNA (285bp) protein (95aa)
Virulence sensor protein BvgS {ECO:0000313|EMBL:EXI77790.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EXI77790.1};; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
Amino acid-binding domain sensor hybrid histidine kinase id=4815043 bin=GWC2_Pelobacter_58_13 species=Psychromonas ingrahamii genus=Psychromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
multi-sensor hybrid histidine kinase
RTP_03222018_0_2um_scaffold_749_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3061..3501
DNA (441bp) protein (147aa)
Uncharacterized protein id=1362320 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_749_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3513..3848
DNA (336bp) protein (112aa)
Conserved hypothetical secreted protein id=1351592 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_749_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3880..4341
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003725B88
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_749_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4430..4684
DNA (255bp) protein (85aa)
id=4961696 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
RTP_03222018_0_2um_scaffold_749_10
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4790..4927
DNA (138bp) protein (46aa)
Tax=RBG_16_Gammaproteobacteria_62_13__curated
RTP_03222018_0_2um_scaffold_749_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5092..5319
DNA (228bp) protein (76aa)
Uncharacterized protein id=1351596 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rhodanese-like protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_749_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5424..6410
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B6B5_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36052.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_03222018_0_2um_scaffold_749_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6630..7205
DNA (576bp) protein (192aa)
cation-transporting ATPase transmembrane protein n=1 Tax=Methylotenera mobilis RepID=UPI000380151C
ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RTP_03222018_0_2um_scaffold_749_14
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7257..8780
DNA (1524bp) protein (508aa)
cation-transporting ATPase transmembrane protein n=1 Tax=Methylotenera mobilis RepID=UPI000380151C
cation transporting ATPase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RTP_03222018_0_2um_scaffold_749_15
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8980..9489
DNA (510bp) protein (170aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_749_16
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9663..10349
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000375F917
Sodium/proton antiporter
Tax=RBG_16_Gamma2_65_34_curated
RTP_03222018_0_2um_scaffold_749_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10355..10960
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000368F466
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
RTP_03222018_0_2um_scaffold_749_18
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10957..11415
DNA (459bp) protein (153aa)
UbiE/COQ5 methyltransferase (EC:2.1.1.103); K05929 phosphoethanolamine N-methyltransferase [EC:2.1.1.103] id=15193195 bin=GWC2_NOV_55_46 species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
type 11 methyltransferase
Tax=GWA2_Deltaproteobacteria_55_10_curated
RTP_03222018_0_2um_scaffold_749_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11593..12153
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ91_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97276.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_749_20
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12166..12354
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B1FA
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12657.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_749_21
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12351..13001
DNA (651bp) protein (217aa)
Protein-S-isoprenylcysteine methyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RIB5_PHEZH
protein-S-isoprenylcysteine methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
RTP_03222018_0_2um_scaffold_749_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13083..13517
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F33E8
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RTP_03222018_0_2um_scaffold_749_23
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13840..14721
DNA (882bp) protein (294aa)
dienelactone hydrolase n=1 Tax=Thiobacillus denitrificans RepID=UPI000364FE7D
Dienelacton hydrolase {ECO:0000313|EMBL:CAI78505.1}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
dienelactone hydrolase
RTP_03222018_0_2um_scaffold_749_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14723..15367
DNA (645bp) protein (215aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase id=1342782 bin=GWE1_T_denit_62_9 species=uncultured beta proteobacterium genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_749_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16027..16509
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003744617
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_749_26
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16539..17153
DNA (615bp) protein (205aa)
Protein drgA n=1 Tax=mine drainage metagenome RepID=E6QUH7_9ZZZZ
nitroreductase
Tax=RBG_16_Betaproteobacteria_58_11_curated
RTP_03222018_0_2um_scaffold_749_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17229..17762
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D7032
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96438.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_03222018_0_2um_scaffold_749_28
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17896..18414
DNA (519bp) protein (173aa)
Predicted pyridoxamine 5'-phosphate oxidase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G3G7_9RHIZ
Predicted pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:EAU41864.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
pyridoxamine 5'-phosphate oxidase-like protein
RTP_03222018_0_2um_scaffold_749_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18420..19256)
DNA (837bp) protein (279aa)
DNAase n=1 Tax=Thiobacillus thioparus RepID=UPI00037523B5
TatD related DNase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_749_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19263..19928)
DNA (666bp) protein (222aa)
Putative uncharacterized protein id=1342788 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 217 in total

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