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RTP_03222018_0_2um_scaffold_1969

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_1969_1
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..371)
DNA (369bp) protein (123aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB78_9PROT
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:GAO35902.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
RTP_03222018_0_2um_scaffold_1969_2

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comp(375..1370)
DNA (996bp) protein (332aa)
Arabinose 5-phosphate isomerase {ECO:0000313|EMBL:CBI10173.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CBI10173.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Arabinose 5-phosphate isomerase n=1 Tax=mine drainage metagenome RepID=E6QSF1_9ZZZZ
capsule expression protein KpsF/GutQ
RTP_03222018_0_2um_scaffold_1969_3

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1472..3445
DNA (1974bp) protein (658aa)
Putative glutathione-regulated potassium-efflux system protein kefB (K(+)/H(+) antiporter) (NEM-activable K(+)/H(+) antiporter) KefB-like n=1 Tax=mine drainage metagenome RepID=E6QSF0_9ZZZZ
Putative glutathione-regulated potassium-efflux system protein kefB (K(+)/H(+) antiporter) (NEM-activable K(+)/H(+) antiporter) KefB-like {ECO:0000313|EMBL:CBI10172.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
potassium efflux system protein
RTP_03222018_0_2um_scaffold_1969_4

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comp(3575..5536)
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QWY8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11762.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_1969_5
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5606..6424)
DNA (819bp) protein (273aa)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GGB7_NITSI
Formamidopyrimidine-DNA glycosylase
Tax=GWA2_Gallionellales_60_142_curated
RTP_03222018_0_2um_scaffold_1969_6
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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6458..7834
DNA (1377bp) protein (459aa)
Outer membrane efflux protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GW0_DECAR
Outer membrane efflux protein
Tax=CG_Beta_01
RTP_03222018_0_2um_scaffold_1969_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7869..8222
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2W866_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42294.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_1969_8
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8219..9364
DNA (1146bp) protein (382aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRY9_SIDLE
efflux transporter, RND family, MFP subunit
Tax=CG_Beta_01
RTP_03222018_0_2um_scaffold_1969_9
CG_Gallio_01, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9367..10062
DNA (696bp) protein (232aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QG95_AZOSU
antimicrobial peptide ABC transporter ATPase
Tax=CG_Gallio_01
RTP_03222018_0_2um_scaffold_1969_10
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10059..11282
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRZ1_SIDLE
hypothetical protein
Tax=CG_Beta_01
RTP_03222018_0_2um_scaffold_1969_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11287..11919)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CA8C4
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_1969_12
unknown

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comp(11909..12028)
DNA (120bp) protein (40aa)

This feature has no annotations

RTP_03222018_0_2um_scaffold_1969_13
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12074..13327)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SEK1_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC30923.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
RTP_03222018_0_2um_scaffold_1969_14
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13549..13836)
DNA (288bp) protein (96aa)
General secretion pathway protein H n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AI9_DECAR
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
RTP_03222018_0_2um_scaffold_1969_15
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13871..14755)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00037C1207
Uncharacterized protein {ECO:0000313|EMBL:EXI65219.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
conserved hypothetical protein, membrane or secreted
RTP_03222018_0_2um_scaffold_1969_16
unknown

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comp(14775..15170)
DNA (396bp) protein (132aa)

This feature has no annotations

RTP_03222018_0_2um_scaffold_1969_17
unknown

Not on your lists

comp(15167..15697)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003729C18
RTP_03222018_0_2um_scaffold_1969_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15694..16965)
DNA (1272bp) protein (424aa)
monoheme cytochrome SoxX id=12497741 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
monoheme cytochrome SoxX
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_03222018_0_2um_scaffold_1969_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16962..17171)
DNA (210bp) protein (70aa)
Type IV pilus assembly protein PilC n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLB6_THIDA
type IV pilus assembly protein PilC
Type IV pilus assembly protein PilC {ECO:0000313|EMBL:AAZ96499.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 19 items

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