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RTP_03222018_0_2um_scaffold_2391

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_2391_1
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..444
DNA (444bp) protein (148aa)
ATP-dependent RNA helicase n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZD7_JANMA
dbpA; ATP-dependent 23S rRNA helicase DbpA
ATP-dependent 23S rRNA helicase DbpA {ECO:0000313|EMBL:AIY41825.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
RTP_03222018_0_2um_scaffold_2391_2
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(527..1225)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QL04_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV26661.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
RTP_03222018_0_2um_scaffold_2391_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1310..2179)
DNA (870bp) protein (290aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
glycerol-3-phosphate dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003601BC5
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_2391_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2176..2604)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DN19_METS0
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
RTP_03222018_0_2um_scaffold_2391_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2609..3067)
DNA (459bp) protein (153aa)
preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB id=12493224 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Protein-export protein secB
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_2391_6
Bartonella tamiae, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3139..4032)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Bartonella tamiae Th239 RepID=J1K3E6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJF91650.1}; TaxID=1094558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella tamiae Th239.;"
restriction endonuclease HaeIII
RTP_03222018_0_2um_scaffold_2391_7
Bartonella tamiae, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4036..5100)
DNA (1065bp) protein (355aa)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Bartonella tamiae Th239 RepID=J0QZQ6_9RHIZ
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EJF91651.1}; TaxID=1094558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella tamiae Th239.;"
DNA-cytosine methyltransferase
RTP_03222018_0_2um_scaffold_2391_8
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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5193..6692
DNA (1500bp) protein (500aa)
Glycosyl transferase family protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE28_GALCS
glycosyl transferase family protein
Tax=GWA2_Gallionellales_54_124_curated
RTP_03222018_0_2um_scaffold_2391_9
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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6700..8043
DNA (1344bp) protein (448aa)
FAD linked oxidase domain protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE27_GALCS
FAD linked oxidase domain-containing protein
Tax=RBG_16_Zixibacteria_53_22_curated
RTP_03222018_0_2um_scaffold_2391_10
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

8036..8776
DNA (741bp) protein (247aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE26_GALCS
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Zixibacteria_53_22_curated
RTP_03222018_0_2um_scaffold_2391_11
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8773..9387
DNA (615bp) protein (205aa)
HAD-superfamily subfamily IB hydrolase, TIGR01490 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C548_NITHN
HAD-superfamily hydrolase
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:ADE15271.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
RTP_03222018_0_2um_scaffold_2391_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9417..10073)
DNA (657bp) protein (219aa)
sulfurtransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EFCC5
rhodanese-like protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_03222018_0_2um_scaffold_2391_13
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10402..11250
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9K1_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34250.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_03222018_0_2um_scaffold_2391_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11260..12708
DNA (1449bp) protein (483aa)
Protein-export membrane protein SecF n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIB2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO35257.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
protein-export membrane protein SecF
RTP_03222018_0_2um_scaffold_2391_15
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12774..13079
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FS2_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ46309.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Displaying 15 items

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