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RTP_03222018_0_2um_scaffold_7101

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_7101_1
unknown

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comp(2..115)
DNA (114bp) protein (38aa)

This feature has no annotations

RTP_03222018_0_2um_scaffold_7101_2
unknown

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comp(166..279)
DNA (114bp) protein (38aa)

This feature has no annotations

RTP_03222018_0_2um_scaffold_7101_3
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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364..963
DNA (600bp) protein (200aa)
TetR family transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB68_9PROT
TetR family transcriptional regulator
Tax=CG_Beta_01
RTP_03222018_0_2um_scaffold_7101_4

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1066..1461
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QUH5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10898.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_7101_5

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comp(1663..2637)
DNA (975bp) protein (325aa)
Putative oxygenase n=1 Tax=mine drainage metagenome RepID=E6QSU7_9ZZZZ
Putative oxygenase {ECO:0000313|EMBL:CBI10319.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
oxidoreductase FAD/NAD(P)-binding domain protein
RTP_03222018_0_2um_scaffold_7101_6

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comp(2661..3029)
DNA (369bp) protein (123aa)
Cyanoglobin (Hemoglobin) (Hb) n=1 Tax=mine drainage metagenome RepID=E6QSU8_9ZZZZ
Cyanoglobin (Hemoglobin) (Hb) {ECO:0000313|EMBL:CBI10320.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
globin
RTP_03222018_0_2um_scaffold_7101_7

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3224..3655
DNA (432bp) protein (144aa)
HTH-type transcriptional regulator nsrR n=1 Tax=mine drainage metagenome RepID=E6QSU9_9ZZZZ
HTH-type transcriptional regulator nsrR {ECO:0000313|EMBL:CBI10321.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
nsrR; nitric oxide sensitive transcriptional regulator
RTP_03222018_0_2um_scaffold_7101_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3845..4891
DNA (1047bp) protein (349aa)
cytochrome C n=1 Tax=Thiobacillus thioparus RepID=UPI00036AE71A
cytochrome c
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_7101_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4888..5346
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037F219C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_03222018_0_2um_scaffold_7101_10
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5470..6441)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037530A6
PGAP1 family protein
Tax=BJP_08E140C01_Dechloromonas_61_78
RTP_03222018_0_2um_scaffold_7101_11
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6534..7154)
DNA (621bp) protein (207aa)
Cation efflux protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UFA0_9GAMM
cation efflux protein
Tax=RBG_16_Betaproteobacteria_56_24_curated
RTP_03222018_0_2um_scaffold_7101_12
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7480..7626)
DNA (147bp) protein (49aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
Superoxide dismutase [Cu-Zn] n=33 Tax=Bordetella RepID=F4LD78_BORPC
superoxide dismutase
Displaying 12 items

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