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RTP_03222018_0_2um_scaffold_11734

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_11734_1

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comp(177..449)
DNA (273bp) protein (91aa)
Fe(II) trafficking protein YggX n=1 Tax=mine drainage metagenome RepID=E6QTL8_9ZZZZ
Fe(II) trafficking protein YggX {ECO:0000313|EMBL:CBI10590.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_03222018_0_2um_scaffold_11734_2
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(468..1517)
DNA (1050bp) protein (350aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AMW8_9PROT
RTP_03222018_0_2um_scaffold_11734_3

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1682..2605
DNA (924bp) protein (308aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) {ECO:0000313|EMBL:CBI10592.1}; EC=6.3.2.6 {ECO:0000313|EMBL:CBI10592.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) n=1 Tax=mine drainage metagenome RepID=E6QTM0_9ZZZZ
RTP_03222018_0_2um_scaffold_11734_4
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2677..4074)
DNA (1398bp) protein (466aa)
nitrogen regulation protein NR(I) n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00037125EB
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:EUJ11548.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
nitrogen metabolism transcriptional regulator, NtrC, Fis family
RTP_03222018_0_2um_scaffold_11734_5
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4085..4843)
DNA (759bp) protein (253aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Signal transduction histidine kinase NtrB n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9G0_9PROT
signal transduction histidine kinase NtrB
Displaying 5 items

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