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RTP_03222018_0_2um_scaffold_4082

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_03222018_0_2um_scaffold_4082_1
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..546)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A41E5
Uncharacterized protein {ECO:0000313|EMBL:KFC74851.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
methyltransferase domain protein
RTP_03222018_0_2um_scaffold_4082_2
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(626..1174)
DNA (549bp) protein (183aa)
Flagellar transcriptional regulator FlhC n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZU4_JANMA
flhC; transcriptional activator FlhC
Flagellar transcriptional regulator FlhC {ECO:0000256|HAMAP-Rule:MF_01891, ECO:0000256|PIRNR:PIRNR003159}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
RTP_03222018_0_2um_scaffold_4082_3
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1203..1520)
DNA (318bp) protein (106aa)
flagellar transcriptional regulator FlhD n=1 Tax=Janthinobacterium lividum RepID=UPI0002898609
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
flhD; transcriptional activator FlhD
RTP_03222018_0_2um_scaffold_4082_4
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2042..2272)
DNA (231bp) protein (77aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SVF2_JANMA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
RTP_03222018_0_2um_scaffold_4082_5

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comp(2275..4428)
DNA (2154bp) protein (718aa)
GTP pyrophosphokinase {ECO:0000313|EMBL:CBI09991.1}; EC=2.7.6.5 {ECO:0000313|EMBL:CBI09991.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GTP diphosphokinase, RelA/SpoT protein (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=mine drainage metagenome RepID=E6QRW9_9ZZZZ
RTP_03222018_0_2um_scaffold_4082_6
unknown

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comp(4531..4692)
DNA (162bp) protein (54aa)

This feature has no annotations

RTP_03222018_0_2um_scaffold_4082_7

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comp(4723..6996)
DNA (2274bp) protein (758aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=mine drainage metagenome RepID=E6QU32_9ZZZZ
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:CBI10754.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA internalization-related competence protein ComEC/Rec2
RTP_03222018_0_2um_scaffold_4082_8
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7093..8694)
DNA (1602bp) protein (534aa)
UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B) n=1 Tax=mine drainage metagenome RepID=E6QU31_9ZZZZ
uvrB; excinuclease ABC subunit B
Tax=RBG_16_Betaproteobacteria_58_11_curated
Displaying 8 items

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