Consensus taxonomy: Betaproteobacteria → Proteobacteria → Bacteria
Contig (seq size) | Coding Density (%) | Species | Genus | Order | Class | Phylum | Domain |
---|---|---|---|---|---|---|---|
RTP_03222018_0_2um_scaffold_22036
3308 bp | 15.05 x | 52.27% |
1.00212 |
Dechloromonas aro...
25.00%
|
unknown
50.00%
|
Hydrogenophilales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_41030
3294 bp | 18.49 x | 48.27% |
0.738616 |
RIFOXYD1_FULL_Hyd...
25.00%
|
unknown
100.00%
|
unknown
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_22267
3286 bp | 19.22 x | 49.73% |
0.932136 |
RIFCSPLOWO2_12_FU...
33.33%
|
unknown
100.00%
|
unknown
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_03222018_0_2um_scaffold_22297
3281 bp | 13.58 x | 47.97% |
0.99939 |
RIFOXYD1_FULL_Hyd...
33.33%
|
unknown
66.67%
|
Hydrogenophilales
33.33%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_22681
3249 bp | 16.34 x | 48.66% |
0.98892 |
Candidatus Accumu...
20.00%
|
unknown
40.00%
|
Gallionellales
40.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_40293
3220 bp | 14.95 x | 46.80% |
0.421118 |
GWE1_Thiobacillus...
50.00%
|
Sulfuricella
50.00%
|
Hydrogenophilales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_23076
3214 bp | 9.85 x | 48.69% |
0.813939 |
Ralstonia mannito...
50.00%
|
Ralstonia
50.00%
|
Burkholderiales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_23254
3198 bp | 12.71 x | 50.72% |
0.984053 |
CG_Beta_01
20.00%
|
unknown
80.00%
|
unknown
80.00%
|
Betaproteobacteria
60.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_23366
3187 bp | 10.97 x | 50.42% |
0.756825 |
R_Burkholderiales...
25.00%
|
unknown
50.00%
|
Burkholderiales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_23634
3163 bp | 20.44 x | 50.84% |
0.987354 |
RIFOXYD1_FULL_Hyd...
25.00%
|
unknown
75.00%
|
Hydrogenophilales
50.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
RTP_03222018_0_2um_scaffold_23784
3151 bp | 15.09 x | 48.18% |
0.878769 |
CG_Beta_01
50.00%
|
unknown
100.00%
|
unknown
100.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_24603
3083 bp | 11.43 x | 45.25% |
0.900097 |
RIFOXYD1_FULL_Hyd...
33.33%
|
unknown
66.67%
|
Hydrogenophilales
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_03222018_0_2um_scaffold_25408
3021 bp | 13.56 x | 50.51% |
0.603774 |
Betaproteobacteri...
50.00%
|
unknown
100.00%
|
unknown
100.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_25573
3009 bp | 10.22 x | 50.58% |
0.992024 |
Sulfuricella deni...
100.00%
|
Sulfuricella
100.00%
|
Sulfuricellales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_26011
2975 bp | 11.55 x | 50.55% |
0.596975 |
Achromobacter sp....
50.00%
|
Achromobacter
50.00%
|
Burkholderiales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_26096
2970 bp | 16.62 x | 43.67% |
0.90202 |
Herbaspirillum sp...
66.67%
|
Herbaspirillum
66.67%
|
Burkholderiales
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_03222018_0_2um_scaffold_26831
2914 bp | 16.83 x | 48.28% |
0.923473 |
mine drainage met...
33.33%
|
unknown
100.00%
|
Hydrogenophilales
33.33%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_03222018_0_2um_scaffold_27092
2896 bp | 10.77 x | 49.97% |
0.95511 |
Candidatus Accumu...
25.00%
|
unknown
50.00%
|
unknown
50.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
RTP_03222018_0_2um_scaffold_38482
2877 bp | 16.11 x | 45.43% |
0.741397 |
RBG_16_Betaproteo...
40.00%
|
unknown
80.00%
|
unknown
60.00%
|
Betaproteobacteria
60.00%
|
Proteobacteria
60.00%
|
Bacteria
60.00%
|
RTP_03222018_0_2um_scaffold_27531
2864 bp | 16.34 x | 48.95% |
0.996159 |
RIFOXYD1_FULL_Hyd...
50.00%
|
unknown
50.00%
|
Hydrogenophilales
75.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_27649
2857 bp | 12.76 x | 45.50% |
0.879944 |
CG_Hydro_01
33.33%
|
unknown
100.00%
|
Hydrogenophilales
33.33%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_03222018_0_2um_scaffold_27693
2854 bp | 10.62 x | 47.62% |
0.826209 |
GWE2_Gallionellal...
20.00%
|
unknown
80.00%
|
Burkholderiales
40.00%
|
Betaproteobacteria
80.00%
|
Proteobacteria
80.00%
|
Bacteria
80.00%
|
RTP_03222018_0_2um_scaffold_27761
2848 bp | 15.85 x | 47.51% |
1.00176 |
Burkholderiaceae ...
33.33%
|
unknown
66.67%
|
Burkholderiales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_27842
2843 bp | 12.35 x | 51.81% |
0.932817 |
Burkholderia mallei
50.00%
|
Burkholderia
50.00%
|
Burkholderiales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_28225
2818 bp | 13.36 x | 46.98% |
0.964514 |
mine drainage met...
33.33%
|
unknown
66.67%
|
Sulfuricellales
33.33%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_03222018_0_2um_scaffold_28237
2817 bp | 10.86 x | 43.27% |
0.986156 |
RIFCSPLOWO2_12_FU...
50.00%
|
unknown
100.00%
|
unknown
100.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
RTP_03222018_0_2um_scaffold_28475
2801 bp | 11.35 x | 46.41% |
0.342735 |
Nitrosomonas sp. ...
100.00%
|
Nitrosomonas
100.00%
|
Nitrosomonadales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_29660
2725 bp | 13.65 x | 48.88% |
1.00073 |
Sulfuricella deni...
50.00%
|
Sulfuricella
50.00%
|
Sulfuricellales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_29687
2723 bp | 15.64 x | 47.63% |
0.894602 |
Acidithiobacillus...
33.33%
|
Acidithiobacillus
33.33%
|
Acidithiobacillales
33.33%
|
Betaproteobacteria
66.67%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_29964
2705 bp | 13.53 x | 49.02% |
0.861738 |
RIFCSPLOWO2_12_FU...
25.00%
|
unknown
50.00%
|
unknown
50.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
RTP_03222018_0_2um_scaffold_29984
2704 bp | 16.86 x | 48.26% |
0.945266 |
R_Gallionellales_...
25.00%
|
unknown
75.00%
|
Gallionellales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_30478
2676 bp | 13.68 x | 47.05% |
0.9787 |
RIFOXYD1_FULL_Hyd...
66.67%
|
unknown
66.67%
|
Hydrogenophilales
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_30501
2675 bp | 12.62 x | 46.36% |
0.874766 |
GWA2_Rhodocyclale...
25.00%
|
unknown
75.00%
|
Rhodocyclales
25.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
RTP_03222018_0_2um_scaffold_30571
2672 bp | 9.99 x | 40.23% |
0.774701 |
Candidatus Accumu...
25.00%
|
Candidatus Accumu...
25.00%
|
unknown
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
RTP_03222018_0_2um_scaffold_30685
2665 bp | 14.02 x | 49.42% |
0.932083 |
RIFOXYD1_FULL_Hyd...
20.00%
|
unknown
60.00%
|
Hydrogenophilales
40.00%
|
Betaproteobacteria
60.00%
|
Proteobacteria
80.00%
|
Bacteria
80.00%
|
RTP_03222018_0_2um_scaffold_30773
2660 bp | 14.66 x | 42.14% |
0.645113 |
Herbaspirillum sp...
25.00%
|
unknown
75.00%
|
Burkholderiales
25.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
RTP_03222018_0_2um_scaffold_30824
2657 bp | 14.23 x | 50.02% |
0.991344 |
Sulfuricella sp. T08
50.00%
|
Sulfuricella
50.00%
|
Sulfuricellales
50.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_31166
2638 bp | 17.29 x | 46.17% |
0.955269 |
Thiobacillus deni...
33.33%
|
Thiobacillus
33.33%
|
Hydrogenophilales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_31647
2611 bp | 16.03 x | 41.55% |
0.443508 |
Nitrosomonas sp. ...
50.00%
|
Nitrosomonas
50.00%
|
Nitrosomonadales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_31767
2604 bp | 14.98 x | 46.51% |
0.968894 |
Thauera sp. 63
25.00%
|
unknown
50.00%
|
Rhodocyclales
25.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
RTP_03222018_0_2um_scaffold_32052
2588 bp | 17.04 x | 45.56% |
0.898377 |
CG_Beta_01
33.33%
|
unknown
66.67%
|
Hydrogenophilales
33.33%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_32720
2552 bp | 21.69 x | 47.69% |
0.834639 |
Nitrosomonas sp. ...
100.00%
|
Nitrosomonas
100.00%
|
Nitrosomonadales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_32856
2545 bp | 14.79 x | 43.03% |
0.844401 |
Sulfuricella sp. T08
40.00%
|
unknown
60.00%
|
unknown
60.00%
|
Betaproteobacteria
60.00%
|
Proteobacteria
80.00%
|
Bacteria
80.00%
|
RTP_03222018_0_2um_scaffold_33152
2529 bp | 21.65 x | 45.35% |
0.23013 |
Comamonas aquatica
100.00%
|
Comamonas
100.00%
|
Burkholderiales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_33650
2502 bp | 10.61 x | 47.36% |
0.970024 |
RBG_16_Betaproteo...
50.00%
|
unknown
100.00%
|
Hydrogenophilales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_33666
2501 bp | 12.42 x | 44.46% |
0.705718 |
Thiobacillus deni...
20.00%
|
unknown
40.00%
|
Hydrogenophilales
40.00%
|
Betaproteobacteria
60.00%
|
Proteobacteria
80.00%
|
Bacteria
80.00%
|
RTP_03222018_0_2um_scaffold_34136
2478 bp | 11.74 x | 42.53% |
0.958838 |
uncultured bacterium
25.00%
|
unknown
75.00%
|
Sulfuricellales
25.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
75.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_35002
2436 bp | 16.38 x | 50.16% |
0.982759 |
Sulfuricella sp. T08
66.67%
|
Sulfuricella
100.00%
|
Sulfuricellales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_35497
2411 bp | 11.01 x | 45.71% |
0.925757 |
Sulfuricella deni...
100.00%
|
Sulfuricella
100.00%
|
Sulfuricellales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_35512
2410 bp | 11.08 x | 44.61% |
0.921162 |
Methyloversatilis...
25.00%
|
unknown
50.00%
|
Gallionellales
50.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|