Consensus taxonomy: Betaproteobacteria → Proteobacteria → Bacteria
Contig (seq size) | Coding Density (%) | Species | Genus | Order | Class | Phylum | Domain |
---|---|---|---|---|---|---|---|
RTP_03222018_0_2um_scaffold_35881
2393 bp | 12.79 x | 47.85% |
1.01421 |
Leptothrix cholodnii
50.00%
|
Leptothrix
50.00%
|
Burkholderiales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_35982
2389 bp | 15.76 x | 49.90% |
0.654249 |
GWE2_Gallionellal...
40.00%
|
unknown
80.00%
|
Gallionellales
40.00%
|
Betaproteobacteria
60.00%
|
Proteobacteria
80.00%
|
Bacteria
80.00%
|
RTP_03222018_0_2um_scaffold_35993
2388 bp | 11.37 x | 47.11% |
1.00754 |
RIFOXYA1_FULL_Hyd...
50.00%
|
Thiobacillus
50.00%
|
Hydrogenophilales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_36227
2377 bp | 14.58 x | 47.96% |
0.952882 |
RIFCSPLOWO2_12_FU...
33.33%
|
Nitrosospira
33.33%
|
Nitrosomonadales
33.33%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_36998
2342 bp | 16.59 x | 47.91% |
0.999146 |
GWE1_Thiobacillus...
33.33%
|
unknown
66.67%
|
Hydrogenophilales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_37782
2304 bp | 14.39 x | 47.96% |
0.924479 |
RIFOXYB12_FULL_Ga...
25.00%
|
unknown
100.00%
|
unknown
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_38432
2276 bp | 9.89 x | 48.02% |
0.763181 |
Nitrosomonas euro...
33.33%
|
Nitrosomonas
33.33%
|
Nitrosomonadales
33.33%
|
Betaproteobacteria
66.67%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_39351
2237 bp | 9.86 x | 52.21% |
0.981672 |
GWA2_Gallionellal...
50.00%
|
Synechococcus
50.00%
|
Gallionellales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_39667
2223 bp | 12.48 x | 45.07% |
0.944669 |
Collimonas fungiv...
33.33%
|
Janthinobacterium
66.67%
|
Burkholderiales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_39974
2210 bp | 9.98 x | 43.62% |
0.868778 |
Thiobacillus pros...
20.00%
|
unknown
80.00%
|
unknown
60.00%
|
Betaproteobacteria
60.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_40136
2203 bp | 16.27 x | 51.07% |
0.999546 |
Herbaspirillum se...
100.00%
|
Herbaspirillum
100.00%
|
Burkholderiales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_41094
2168 bp | 13.98 x | 48.85% |
0.999077 |
Sulfuricella sp. T08
100.00%
|
Sulfuricella
100.00%
|
Sulfuricellales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_41427
2155 bp | 16.43 x | 45.48% |
0.941067 |
Sulfuricella deni...
50.00%
|
Sulfuricella
50.00%
|
Sulfuricellales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_41468
2154 bp | 19.64 x | 45.96% |
0.9039 |
Pseudogulbenkiani...
50.00%
|
Pseudogulbenkiania
50.00%
|
Neisseriales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_41910
2138 bp | 14.31 x | 51.73% |
0.91768 |
RIFCSPLOWO2_12_FU...
33.33%
|
unknown
100.00%
|
Hydrogenophilales
33.33%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_41949
2136 bp | 14.54 x | 51.40% |
0.981742 |
Methylovorus gluc...
50.00%
|
Methylovorus
50.00%
|
Methylophilales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_42185
2128 bp | 15.30 x | 45.86% |
0.823308 |
Nitrosomonas sp. ...
100.00%
|
Nitrosomonas
100.00%
|
Nitrosomonadales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_42232
2126 bp | 12.77 x | 43.74% |
0.414864 |
Oxalobacteraceae ...
25.00%
|
Xanthomonas
25.00%
|
Burkholderiales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_44126
2053 bp | 15.85 x | 48.03% |
0.946907 |
mine drainage met...
33.33%
|
unknown
100.00%
|
unknown
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_03222018_0_2um_scaffold_44280
2048 bp | 10.91 x | 49.32% |
0.930176 |
RIFOXYA1_FULL_Hyd...
50.00%
|
unknown
100.00%
|
Hydrogenophilales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_44491
2041 bp | 13.23 x | 47.87% |
0.975992 |
RBG_16_Betaproteo...
25.00%
|
unknown
50.00%
|
Acidithiobacillales
25.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_72377
2020 bp | 10.47 x | 50.10% |
0.833168 |
Cupriavidus basil...
33.33%
|
unknown
66.67%
|
Burkholderiales
33.33%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_03222018_0_2um_scaffold_45238
2015 bp | 14.22 x | 52.26% |
0.885856 |
GWE1_Thiobacillus...
33.33%
|
unknown
100.00%
|
Hydrogenophilales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_45862
1992 bp | 13.93 x | 44.43% |
0.944277 |
BJP_08E140C01_10K...
100.00%
|
unknown
100.00%
|
Methylophilales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_46254
1979 bp | 12.35 x | 50.63% |
0.944416 |
Azoarcus sp. KH32C
50.00%
|
Azoarcus
50.00%
|
Rhodocyclales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_46368
1975 bp | 10.33 x | 43.49% |
0.991899 |
Massilia sp. JS1662
33.33%
|
Massilia
33.33%
|
Burkholderiales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_46520
1970 bp | 17.28 x | 45.79% |
0.843655 |
RBG_16_Betaproteo...
50.00%
|
unknown
100.00%
|
Hydrogenophilales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_47685
1932 bp | 9.78 x | 49.53% |
0.840062 |
Pseudogulbenkiani...
50.00%
|
Pseudogulbenkiania
50.00%
|
Neisseriales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_48654
1901 bp | 11.84 x | 48.66% |
0.771699 |
Sulfuricella sp. T08
100.00%
|
Sulfuricella
100.00%
|
Sulfuricellales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_49445
1877 bp | 11.03 x | 48.32% |
0.949387 |
Acidovorax citrulli
100.00%
|
Acidovorax
100.00%
|
Burkholderiales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_50068
1859 bp | 13.47 x | 48.63% |
0.973104 |
CG_Hydro_01
50.00%
|
unknown
100.00%
|
Hydrogenophilales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_50087
1859 bp | 15.57 x | 45.83% |
0.907477 |
unknown
50.00%
|
unknown
50.00%
|
unknown
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_50201
1855 bp | 20.70 x | 47.17% |
0.713208 |
Hylemonella gracilis
33.33%
|
Hylemonella
33.33%
|
unknown
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_03222018_0_2um_scaffold_50449
1848 bp | 9.74 x | 48.21% |
0.813312 |
CG_Desulfarul_01
25.00%
|
unknown
50.00%
|
Rhodocyclales
50.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_50858
1837 bp | 10.94 x | 48.72% |
0.968427 |
GWE1_Thiobacillus...
100.00%
|
unknown
100.00%
|
Hydrogenophilales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_51348
1823 bp | 14.89 x | 50.52% |
0.979155 |
RBG_16_Betaproteo...
66.67%
|
unknown
66.67%
|
Hydrogenophilales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_51786
1811 bp | 13.00 x | 47.93% |
0.950856 |
Polaromonas napht...
33.33%
|
Polaromonas
33.33%
|
Burkholderiales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_53086
1775 bp | 11.75 x | 51.61% |
0.988732 |
Burkholderia sp. ...
33.33%
|
Burkholderia
66.67%
|
Burkholderiales
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_53685
1758 bp | 11.95 x | 46.99% |
0.964164 |
Methylovorus gluc...
33.33%
|
Methylovorus
33.33%
|
Burkholderiales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_53835
1753 bp | 16.09 x | 49.80% |
0.963491 |
Sulfuricella sp. T08
100.00%
|
Sulfuricella
100.00%
|
Sulfuricellales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_54587
1734 bp | 16.44 x | 46.89% |
0.991349 |
Sulfuricella deni...
33.33%
|
Sulfuricella
33.33%
|
Hydrogenophilales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_54732
1730 bp | 13.01 x | 46.07% |
1.00058 |
Thiobacillus deni...
100.00%
|
Thiobacillus
100.00%
|
Hydrogenophilales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_57987
1647 bp | 14.21 x | 44.93% |
0.808743 |
Laribacter hongko...
33.33%
|
unknown
66.67%
|
Neisseriales
33.33%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_59046
1622 bp | 11.47 x | 51.05% |
0.998767 |
CG_Beta_01
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_59375
1614 bp | 12.17 x | 46.03% |
0.884758 |
Pseudogulbenkiani...
50.00%
|
Pseudogulbenkiania
50.00%
|
Neisseriales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_03222018_0_2um_scaffold_60294
1593 bp | 17.70 x | 49.09% |
1.00942 |
Thiobacillus deni...
50.00%
|
Thiobacillus
50.00%
|
Hydrogenophilales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_60883
1580 bp | 9.87 x | 43.42% |
0.63038 |
Sulfuricella deni...
100.00%
|
Sulfuricella
100.00%
|
Sulfuricellales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_61132
1575 bp | 12.67 x | 50.73% |
1.0 |
CG_Beta_01
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_61155
1575 bp | 16.38 x | 47.37% |
0.853333 |
CG_Beta_01
50.00%
|
unknown
100.00%
|
Hydrogenophilales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_03222018_0_2um_scaffold_61535
1566 bp | 13.79 x | 43.23% |
0.622605 |
GWA2_Gallionellal...
50.00%
|
Herminiimonas
50.00%
|
Gallionellales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|