ggKbase home page

RTP_07252018_0_1um_scaffold_3763

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_3763_1
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..891
DNA (891bp) protein (297aa)
inositol oxygenase n=1 Tax=Segetibacter koreensis RepID=UPI00035F452C
Inositol oxygenase {ECO:0000313|EMBL:ETK10575.1}; TaxID=1411021 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 6/7/9.;"
inositol oxygenase
RTP_07252018_0_1um_scaffold_3763_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1368..2336
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C971B
Sodium transporter {ECO:0000313|EMBL:KIC90761.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
sodium transporter
RTP_07252018_0_1um_scaffold_3763_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2290..3006
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C971B
sodium transporter
Sodium transporter {ECO:0000313|EMBL:AHF14236.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RTP_07252018_0_1um_scaffold_3763_4
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

3080..3442
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7S3_CALAS
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
RTP_07252018_0_1um_scaffold_3763_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3543..3905)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH61_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3763_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4141..4593
DNA (453bp) protein (151aa)
(2Fe-2S)-binding protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000376DEFE
(2Fe-2S)-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3763_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4622..6787
DNA (2166bp) protein (722aa)
aldehyde oxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003688CAE
aldehyde oxidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3763_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6896..7216
DNA (321bp) protein (107aa)
Nitrite reductase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FCQ5_9BACT
major anaerobically induced transmembrane protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3763_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7233..8330
DNA (1098bp) protein (366aa)
Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GP58_9SPHI
xanthine dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3763_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8327..8920
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF90_CHIPD">RepID=C7PF90_CHIPD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3763_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8925..9905
DNA (981bp) protein (327aa)
GTP cyclohydrolase subunit MoaA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T808_NIAKG
GTP cyclohydrolase subunit MoaA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3763_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9918..10379
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003604ABE
molybdenum cofactor synthesis domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 12 items

View Taxonomy