ggKbase home page

RTP_07252018_0_1um_scaffold_3888

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_3888_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1..729)
DNA (729bp) protein (243aa)
NUDIX hydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7L5_NIAKG
NUDIX hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3888_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

772..2973
DNA (2202bp) protein (734aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003774FB4
DNA ligase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3888_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3049..3720
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7L8_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3888_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3919..4908)
DNA (990bp) protein (330aa)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7L9_NIAKG
aspartate-semialdehyde dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3888_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5214..6137)
DNA (924bp) protein (308aa)
sugar kinase n=1 Tax=Segetibacter koreensis RepID=UPI000361A34E
PfkB domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3888_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6407..7018
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M2_NIAKG
TetR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_3888_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7161..7940
DNA (780bp) protein (260aa)
Phenylacetate-CoA oxygenase/reductase, PaaK subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M3_NIAKG
phenylacetate-CoA oxygenase/reductase subunit PaaK
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 7 items

View Taxonomy