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RTP_07252018_0_1um_scaffold_1224

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_1224_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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1..222
DNA (222bp) protein (74aa)
alcohol dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00037DD20E
iron-containing alcohol dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_1224_2
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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350..850
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IF70_PSYTT
hypothetical protein
Tax=CG_Maritim_01
RTP_07252018_0_1um_scaffold_1224_3

Not on your lists

1045..1512
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ESB6_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:AIA18430.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein of unknown function DUF606
RTP_07252018_0_1um_scaffold_1224_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1601..4672
DNA (3072bp) protein (1024aa)
Glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELD1_RUNSL
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:AEI51900.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
glycoside hydrolase
RTP_07252018_0_1um_scaffold_1224_5
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4808..5257
DNA (450bp) protein (150aa)
putative metal-dependent hydrolase (EC:3.-.-.-)
Putative metal-dependent hydrolase {ECO:0000313|EMBL:CCH02913.1}; EC=3.-.-.- {ECO:0000313|EMBL:CCH02913.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
Putative metal-dependent hydrolase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KFL0_9BACT
RTP_07252018_0_1um_scaffold_1224_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5283..5714)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z7Q1_BELBD
Uncharacterized protein {ECO:0000313|EMBL:KIA86977.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
RTP_07252018_0_1um_scaffold_1224_7
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5802..6752)
DNA (951bp) protein (317aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQ69_EMTOG
alpha/beta hydrolase fold containing protein
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:AFK01822.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
RTP_07252018_0_1um_scaffold_1224_8
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6836..7306)
DNA (471bp) protein (157aa)
OsmC-like protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VXH8_9FLAO
OsmC-like protein {ECO:0000313|EMBL:EFK36669.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
OsmC family protein
RTP_07252018_0_1um_scaffold_1224_9
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7389..8456)
DNA (1068bp) protein (356aa)
GGDEF protein n=1 Tax=uncultured bacterium RepID=K1Z1M9_9BACT id=717495 bin=RAAC39 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC39 organism_group=Ignavibacteria
histidine kinase
Tax=BJP_08E140C01_Flavobacteriales_35_8
RTP_07252018_0_1um_scaffold_1224_10
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8514..8855)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GWP7_FLAPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ98524.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
RTP_07252018_0_1um_scaffold_1224_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9115..11154)
DNA (2040bp) protein (680aa)
UvrABC system protein B n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH3_NIAKG
Excinuclease ABC subunit B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_1224_12
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11804..12355
DNA (552bp) protein (184aa)
Prolyl 4-hydroxylase alpha subunit n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAT7_9SPHI
Contig102, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75416.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
2OG-Fe(II) oxygenase
RTP_07252018_0_1um_scaffold_1224_13
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12518..12922
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XJ82_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMS34859.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
RTP_07252018_0_1um_scaffold_1224_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13622..14974)
DNA (1353bp) protein (451aa)
Alpha-L-fucosidase {ECO:0000313|EMBL:ACT91401.1}; EC=3.2.1.51 {ECO:0000313|EMBL:ACT91401.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
alpha-L-fucosidase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003786743
alpha-L-fucosidase
RTP_07252018_0_1um_scaffold_1224_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15168..15629
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000375DE91
Uncharacterized protein {ECO:0000313|EMBL:EIL97431.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
RTP_07252018_0_1um_scaffold_1224_16
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15994..18777
DNA (2784bp) protein (928aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KPV3_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52203.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
RTP_07252018_0_1um_scaffold_1224_17
unknown

Not on your lists

comp(18858..19076)
DNA (219bp) protein (73aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_1224_18
unknown

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19197..19256
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 18 items

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