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RTP_07252018_0_1um_scaffold_2676

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_2676_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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2..223
DNA (222bp) protein (74aa)
signal recognition particle n=1 Tax=Segetibacter koreensis RepID=UPI000364F953
signal recognition particle protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2676_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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568..1050
DNA (483bp) protein (161aa)
30S ribosomal protein S16 n=1 Tax=Segetibacter koreensis RepID=UPI0003720DEA
30S ribosomal protein S16
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2676_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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1198..1716
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604F01
16S rRNA processing protein RimM
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2676_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1755..2153
DNA (399bp) protein (133aa)
Thioesterase superfamily protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJF3_RUNSL
thioesterase
Thioesterase superfamily protein {ECO:0000313|EMBL:AEI50447.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
RTP_07252018_0_1um_scaffold_2676_5
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2277..2897)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KQD9_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48965.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
RTP_07252018_0_1um_scaffold_2676_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3041..3628)
DNA (588bp) protein (196aa)
Cyclic nucleotide-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL2_NIAKG
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AEW03259.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
RTP_07252018_0_1um_scaffold_2676_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(3702..5147)
DNA (1446bp) protein (482aa)
Peptidase, S41 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W3F5_9FLAO
peptidase S41
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2676_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5258..6430
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003754693
DNA polymerase IV
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2676_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6542..7177
DNA (636bp) protein (212aa)
1-Cys peroxiredoxin {ECO:0000313|EMBL:AEW03262.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AEW03262.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
1-Cys peroxiredoxin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL5_NIAKG
1-Cys peroxiredoxin
RTP_07252018_0_1um_scaffold_2676_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7405..8682
DNA (1278bp) protein (426aa)
Amidohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRS9_NIAKG
amidohydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2676_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8761..9471)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C1355
pseudouridine synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2676_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9511..10422)
DNA (912bp) protein (304aa)
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT1_NIAKG
pseudouridine synthase Rsu
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 12 items

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