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RTP_07252018_0_1um_scaffold_2797

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_2797_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..232
DNA (231bp) protein (77aa)
Peptidase M23 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ62_CHIPD
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ACU58751.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
RTP_07252018_0_1um_scaffold_2797_2
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(238..528)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G5V6_ECHVK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA80225.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
RTP_07252018_0_1um_scaffold_2797_3
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(596..1333)
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8KYH5_PARAV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB85922.1}; TaxID=765952 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
RTP_07252018_0_1um_scaffold_2797_4
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1389..2069)
DNA (681bp) protein (227aa)
NmrA family protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003808949
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
RTP_07252018_0_1um_scaffold_2797_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2335..2625)
DNA (291bp) protein (97aa)
Transcriptional regulator, MarR family n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FCE5_DESAA
Uncharacterized protein {ECO:0000313|EMBL:KIC92878.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
MarR family transcriptional regulator
RTP_07252018_0_1um_scaffold_2797_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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2753..3784
DNA (1032bp) protein (344aa)
Holliday junction DNA helicase RuvB n=1 Tax=Segetibacter koreensis RepID=UPI00037F18AD
Holliday junction DNA helicase subunit RuvB
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2797_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(3904..4599)
DNA (696bp) protein (232aa)
transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI00037F3BB6
two component transcriptional regulator, winged helix family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2797_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4738..5685)
DNA (948bp) protein (316aa)
Cytochrome-c peroxidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEM7_CHIPD
cytochrome C peroxidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2797_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5755..6126
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E86A4
Chaperonin {ECO:0000313|EMBL:KIC92875.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
chaperonin
RTP_07252018_0_1um_scaffold_2797_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6176..7708
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361D544
ATPase {ECO:0000313|EMBL:KIC92874.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
RTP_07252018_0_1um_scaffold_2797_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7713..9617)
DNA (1905bp) protein (635aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A5747
RecQ familyATP-dependent DNA helicase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2797_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9686..10039)
DNA (354bp) protein (118aa)
S23 ribosomal protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T914_NIAKG
S23 ribosomal protein
S23 ribosomal protein {ECO:0000313|EMBL:AEV96967.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
RTP_07252018_0_1um_scaffold_2797_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10151..12487)
DNA (2337bp) protein (779aa)
ATPase P n=1 Tax=Niabella aurantiaca RepID=UPI000378EF97
ATPase P
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 13 items

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