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RTP_07252018_0_1um_scaffold_2865

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_2865_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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2..307
DNA (306bp) protein (102aa)
malL; oligo-1,6-glucosidase (EC:3.2.1.10)
Oligo-1,6-glucosidase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FNQ8_9FLAO
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_2865_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(550..1959)
DNA (1410bp) protein (470aa)
alpha-L-fucosidase n=1 Tax=Rudanella lutea RepID=UPI000362E4D1
alpha-L-fucosidase
Alpha-L-fucosidase {ECO:0000313|EMBL:AKD54705.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
RTP_07252018_0_1um_scaffold_2865_3
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2062..3042)
DNA (981bp) protein (327aa)
Pectinesterase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERY5_EMTOG
Pectinesterase {ECO:0000313|EMBL:KDN55843.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
Pectinesterase
RTP_07252018_0_1um_scaffold_2865_4
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3205..3666
DNA (462bp) protein (154aa)
Putative acetyltransferase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FM44_9FLAO
Acetyltransferase {ECO:0000313|EMBL:KJS24454.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
N-acetyltransferase GCN5
RTP_07252018_0_1um_scaffold_2865_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3774..5510
DNA (1737bp) protein (579aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9E2_NIAKG
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AEV99132.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
RTP_07252018_0_1um_scaffold_2865_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5522..5674)
DNA (153bp) protein (51aa)
Putative uncharacterized protein id=4100137 bin=GWF2_Bacteroidetes_42_66 species=Psychroflexus gondwanensis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
RTP_07252018_0_1um_scaffold_2865_7
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5787..6230)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS05029.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein AtheD1_10361 id=2271023 bin=GWB2_Bacteroidetes_32_14 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein
RTP_07252018_0_1um_scaffold_2865_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(6268..6456)
DNA (189bp) protein (63aa)
CsbD family protein id=2916680 bin=GWF2_Bacteroidetes_40_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
general stress protein CsbD
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
RTP_07252018_0_1um_scaffold_2865_9
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6635..7117)
DNA (483bp) protein (161aa)
Putative uncharacterized protein id=4899200 bin=GWA2_OP3_52_12 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Uncharacterized protein {ECO:0000313|EMBL:KIA91466.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
RTP_07252018_0_1um_scaffold_2865_10
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7307..7741)
DNA (435bp) protein (145aa)
Response regulator receiver protein id=2986165 bin=GWF2_Bacteroidetes_33_38 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
response regulator receiver protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
RTP_07252018_0_1um_scaffold_2865_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(7728..9746)
DNA (2019bp) protein (673aa)
Diguanylate cyclase/phosphodiesterase id=2986166 bin=GWF2_Bacteroidetes_33_38 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
PAS/PAC sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
RTP_07252018_0_1um_scaffold_2865_12
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9746..9916)
DNA (171bp) protein (57aa)
Transcriptional regulator, AraC family id=1796703 bin=GWB2_Ignavibacteria_35_12 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
transcriptional regulator, arac family
Tax=GWA2_Bacteroidetes_31_9b_curated
Displaying 12 items

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