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RTP_07252018_0_1um_scaffold_7664

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_7664_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..470
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5W4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80108.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
RTP_07252018_0_1um_scaffold_7664_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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505..1458
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PA82_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61086.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
RTP_07252018_0_1um_scaffold_7664_3
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1471..3618
DNA (2148bp) protein (716aa)
OmpA/MotB domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SBG4_PEDSD
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADY51610.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
RTP_07252018_0_1um_scaffold_7664_4
unknown

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3642..4223
DNA (582bp) protein (194aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_7664_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(4369..4593)
DNA (225bp) protein (75aa)
Aminotransferase class V id=4955013 bin=GWC2_Bacteroidetes_40_22 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
aminotransferase class V
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_7664_6
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4697..5539)
DNA (843bp) protein (281aa)
Aminotransferase class V id=4955013 bin=GWC2_Bacteroidetes_40_22 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
aminotransferase class V
Tax=GWA2_Bacteroidetes_40_15_curated
RTP_07252018_0_1um_scaffold_7664_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5746..7260
DNA (1515bp) protein (505aa)
ApbE family lipoprotein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGY1_NIAKG
ApbE family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:AEV99583.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
RTP_07252018_0_1um_scaffold_7664_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7268..7900
DNA (633bp) protein (211aa)
PepSY-associated TM helix domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QNU4_SPILD
PepSY-associated TM helix domain-containing protein
PepSY-associated TM helix domain protein {ECO:0000313|EMBL:ADB37550.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
RTP_07252018_0_1um_scaffold_7664_9
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7920..8633)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BE349
Uncharacterized protein {ECO:0000313|EMBL:BAN69590.1}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
hypothetical protein
RTP_07252018_0_1um_scaffold_7664_10
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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8822..9295
DNA (474bp) protein (158aa)
Non-specific DNA-binding protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FWC0_9FLAO
dps; starvation-inducible DNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Displaying 10 items

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