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RTP_07252018_0_1um_scaffold_6953

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_6953_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(1..564)
DNA (564bp) protein (188aa)
2-phosphosulfolactate phosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF34_NIAKG
2-phosphosulfolactate phosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_6953_2
unknown

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720..953
DNA (234bp) protein (78aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_6953_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(899..1237)
DNA (339bp) protein (113aa)
single-stranded DNA-binding protein n=1 Tax=Segetibacter koreensis RepID=UPI00037FFB29
single-strand binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_6953_4
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1387..2058
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002F7FEB0
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEA45496.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
RTP_07252018_0_1um_scaffold_6953_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2087..2350
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI0003729523
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:AAZ98581.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_07252018_0_1um_scaffold_6953_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2347..2808
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00031FFA2B
Uncharacterized protein {ECO:0000313|EMBL:KIC94250.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
osmotically inducible protein C
RTP_07252018_0_1um_scaffold_6953_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2819..3133
DNA (315bp) protein (105aa)
Rhodanese-like protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID78_FLUTR
Rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:AEA45493.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
RTP_07252018_0_1um_scaffold_6953_8
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3135..3347
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHR7_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA44845.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
RTP_07252018_0_1um_scaffold_6953_9
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3355..3654
DNA (300bp) protein (100aa)
Thioredoxin n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ID77_FLUTR
thioredoxin
Thioredoxin {ECO:0000313|EMBL:AEA45492.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
RTP_07252018_0_1um_scaffold_6953_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3758..4135
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A2FB5
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28379.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
RTP_07252018_0_1um_scaffold_6953_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(4410..4778)
DNA (369bp) protein (123aa)
Rare lipoprotein A n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FTK7_ECHVK
rare lipoprotein A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_07252018_0_1um_scaffold_6953_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4924..5301)
DNA (378bp) protein (126aa)
Aminomethyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF32_NIAKG
aminomethyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 12 items

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