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RTP_07252018_0_1um_scaffold_1693

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_1693_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98..565)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QRQ7_9ZZZZ
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(562..882)
DNA (321bp) protein (107aa)
ferredoxin n=1 Tax=Methylomicrobium buryatense RepID=UPI000344FF3C
(2Fe-2S) ferredoxin
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(949..1446)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFW1_AZOSU
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1452..1745)
DNA (294bp) protein (98aa)
Ferredoxin protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PVS7_9RHOO
fixX_fdx; ferredoxin protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1742..3040)
DNA (1299bp) protein (433aa)
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Azoarcus sp. KH32C RepID=H0PVS8_9RHOO
fixC_etfD; electron-transferring-flavoprotein dehydrogenase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3065..4165)
DNA (1101bp) protein (367aa)
Protein fixB n=1 Tax=mine drainage metagenome RepID=E6QHC8_9ZZZZ
electron transfer flavoprotein subunit alpha
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4191..5036)
DNA (846bp) protein (282aa)
Protein fixA n=1 Tax=mine drainage metagenome RepID=E6QHC9_9ZZZZ
fixA; flavoprotein subunit subunit beta
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5048..5377)
DNA (330bp) protein (110aa)
Nitrogenase-stabilizing/protective protein nifW n=1 Tax=mine drainage metagenome RepID=E6QHD0_9ZZZZ
nifW; nitrogenase stabilizing/protective protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5398..6195)
DNA (798bp) protein (266aa)
Serine O-acetyltransferase n=1 Tax=Azoarcus sp. KH32C RepID=H0PVT2_9RHOO
nifP; serine O-acetyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6207..7349)
DNA (1143bp) protein (381aa)
Homocitrate synthase n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60C57_METCA
nifV; homocitrate synthase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_11
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7510..8625)
DNA (1116bp) protein (372aa)
ald; alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Alanine dehydrogenase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACR5_9PROT
RTP_07252018_0_1um_scaffold_1693_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8788..9096)
DNA (309bp) protein (103aa)
ferredoxin, 2Fe-2S type; K04755 ferredoxin, 2Fe-2S id=12497191 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
(2Fe-2S)-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9128..10996)
DNA (1869bp) protein (623aa)
Chaperone protein HscA homolog n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QJH9_METS6
dnaK; fe-s protein assembly chaperone hsca
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11020..11343)
DNA (324bp) protein (108aa)
Iron-sulfur cluster assembly protein IscA n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WXD0_METML
iron-sulfur cluster assembly protein IscA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11355..11717)
DNA (363bp) protein (121aa)
Putative iron-sulfur cluster insertion protein ErpA n=2 Tax=Taylorella asinigenitalis RepID=G4QA37_TAYAM
erpA; putative iron-sulfur cluster insertion protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11739..12161)
DNA (423bp) protein (141aa)
Scaffold protein n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8ATN3_PLESH
nifU; nifU-like protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12301..13512)
DNA (1212bp) protein (404aa)
iscS; cysteine desulfurase IscS (EC:2.8.1.7)
Cysteine desulfurase n=2 Tax=Burkholderia ambifaria RepID=B1YT28_BURA4
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14011..14601
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y769_LEPCP
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_1693_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14685..14876
DNA (192bp) protein (64aa)
globin n=1 Tax=Thiobacillus thioparus RepID=UPI00035E3890
oxygen-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 19 items

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