ggKbase home page

RTP_07252018_0_1um_scaffold_8375

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_8375_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..420)
DNA (420bp) protein (140aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FAE0E
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_07252018_0_1um_scaffold_8375_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

448..1023
DNA (576bp) protein (192aa)
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-)
ribosomal large subunit pseudouridine synthase E n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E3238
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_8375_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1016..1480
DNA (465bp) protein (155aa)
NUDIX hydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI000366DA63
hydrolase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_8375_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1477..2562
DNA (1086bp) protein (362aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=MNMA_THIDA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_8375_5
unknown

Not on your lists

comp(2576..2752)
DNA (177bp) protein (59aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_8375_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3012..4676
DNA (1665bp) protein (555aa)
Phosphogluconate dehydratase {ECO:0000313|EMBL:EGJ11622.1}; EC=4.2.1.12 {ECO:0000313|EMBL:EGJ11622.1};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
edd; phosphogluconate dehydratase Edd (EC:4.2.1.12)
Phosphogluconate dehydratase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTF4_9BURK
Displaying 6 items

View Taxonomy