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RTP_07252018_0_1um_scaffold_5099

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_5099_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..193
DNA (192bp) protein (64aa)
Major facilitator superfamily protein id=1326772 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
major facilitator superfamily protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_5099_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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226..522
DNA (297bp) protein (99aa)
hypothetical protein id=1326773 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_07252018_0_1um_scaffold_5099_3
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

538..852
DNA (315bp) protein (105aa)
Putative addiction module antidote protein id=1326775 bin=GWE1_T_denit_62_9 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transcriptional regulator
Tax=BJP_08E140C01_Xanthomonadales_64_42
RTP_07252018_0_1um_scaffold_5099_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

852..998
DNA (147bp) protein (49aa)
hypothetical protein id=12493426 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_07252018_0_1um_scaffold_5099_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2080..3804)
DNA (1725bp) protein (575aa)
Putative Adenylate/Guanylate Cyclase id=1326777 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
adenylate/guanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_5099_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3933..5030)
DNA (1098bp) protein (366aa)
chorismate synthase (EC:4.2.3.5)
chorismate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E8789
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_5099_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5218..6297
DNA (1080bp) protein (360aa)
transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] id=12493997 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transaldolase (EC:2.2.1.2)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_5099_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6337..6549
DNA (213bp) protein (71aa)
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase (EC:1.1.1.1 1.1.1.284)
S-(hydroxymethyl)glutathione dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI000364247C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 8 items

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