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RTP_07252018_0_1um_scaffold_2470

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_2470_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..145)
DNA (144bp) protein (48aa)
cell division protein FtsK n=1 Tax=Thiobacillus denitrificans RepID=UPI000376A5D2
DNA translocase FtsK
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2470_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182..1036)
DNA (855bp) protein (285aa)
cell division protein FtsK n=1 Tax=Thiobacillus denitrificans RepID=UPI000376A5D2
DNA translocase FtsK
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2470_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1197..2153
DNA (957bp) protein (319aa)
thioredoxin reductase (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00035C6592
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2470_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2184..2846
DNA (663bp) protein (221aa)
Putative uncharacterized protein id=1348792 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_07252018_0_1um_scaffold_2470_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2880..3335
DNA (456bp) protein (152aa)
peroxiredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037A08DE
bacterioferritin comigratory protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2470_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3342..3701)
DNA (360bp) protein (120aa)
cation:proton antiporter n=1 Tax=Thiobacillus denitrificans RepID=UPI0003677420
cation:proton antiporter
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2470_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3712..3981)
DNA (270bp) protein (90aa)
Multiple resistance and pH regulation protein F n=1 Tax=Thiocapsa marina 5811 RepID=F9UDW4_9GAMM
multisubunit Na+/H+ antiporter subunit MnhF
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2470_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3981..4478)
DNA (498bp) protein (166aa)
Multicomponent K+:H+ antiporter subunit E n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF17_THIDA
monovalent cation/H+ antiporter subunit E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2470_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4475..5998)
DNA (1524bp) protein (508aa)
monovalent cation/H+ antiporter subunit D (EC:1.6.99.5)
cation:proton antiporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DF956
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2470_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5995..6336)
DNA (342bp) protein (114aa)
Multicomponent K+:H+ antiporter subunit C n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLG2_THIDA
monovalent cation/H+ antiporter subunit C
Multicomponent K+:H+ antiporter subunit C {ECO:0000313|EMBL:AAZ96449.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_07252018_0_1um_scaffold_2470_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6336..9131)
DNA (2796bp) protein (932aa)
monovalent cation/H+ antiporter subunit A (EC:1.6.99.5)
cation:proton antiporter n=1 Tax=Thiobacillus denitrificans RepID=UPI000367A2E8
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2470_trna_1
unknown

Not on your lists

comp(9381..9467)
DNA (87bp)
transferRNA Ser
RTP_07252018_0_1um_scaffold_2470_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9645..10949
DNA (1305bp) protein (435aa)
murein transglycosylase n=1 Tax=Thiobacillus denitrificans RepID=UPI00035CFA78
extracellular solute-binding protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2470_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10956..11048)
DNA (93bp) protein (31aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Serine--tRNA ligase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=SYS_THIDA
Displaying 14 items

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