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RTP_07252018_0_1um_scaffold_2561

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_2561_1
unknown

Not on your lists

comp(454..729)
DNA (276bp) protein (92aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_2561_2
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

1390..2136
DNA (747bp) protein (249aa)
ATPase AAA n=1 Tax=Acidovorax avenae RepID=UPI000373D565
AAA ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
RTP_07252018_0_1um_scaffold_2561_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2442..3083)
DNA (642bp) protein (214aa)
Methyltransferase type 11 id=1361658 bin=GWE1_T_denit_62_9 species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
methyltransferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2561_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3080..4264)
DNA (1185bp) protein (395aa)
MFS permease id=1361656 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
MFS permease
Tax=GWE1_Thiobacillus_62_9_curated
RTP_07252018_0_1um_scaffold_2561_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4313..4630)
DNA (318bp) protein (106aa)
Putative uncharacterized protein id=1339539 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2561_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4627..5463)
DNA (837bp) protein (279aa)
Putative uncharacterized protein id=1339546 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2561_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5532..6074)
DNA (543bp) protein (181aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Thiocapsa marina 5811 RepID=F9UAB4_9GAMM
thioredoxin family protein
Tax=CG_Hydro_01
RTP_07252018_0_1um_scaffold_2561_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6085..6645)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UAB3_9GAMM
hypothetical protein
Tax=CG_Hydro_01
RTP_07252018_0_1um_scaffold_2561_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6649..7119)
DNA (471bp) protein (157aa)
Sulfurtransferase id=1345662 bin=GWE1_T_denit_62_9 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rhodanese domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2561_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7116..8432)
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFC2_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2561_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8432..8782)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CU28_SIDLE
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2561_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8790..9518)
DNA (729bp) protein (243aa)
Putative metallo-beta-lactamase family protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFC1_THIDA
metallo-beta-lactamase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2561_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9567..10229)
DNA (663bp) protein (221aa)
Transcription regulatory protein, ArsR family id=1347980 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ArsR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_2561_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10455..10742)
DNA (288bp) protein (96aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWF4_RUBGI
LuxR family two component transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 14 items

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