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RTP_07252018_0_1um_scaffold_14086

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_14086_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..320)
DNA (318bp) protein (106aa)
translocation protein TolB n=1 Tax=Thiobacillus thioparus RepID=UPI00035D970E
tolB; translocation protein TolB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_14086_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(390..1244)
DNA (855bp) protein (285aa)
Putative TonB protein id=1336260 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TonB protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_14086_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1241..1651)
DNA (411bp) protein (137aa)
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR id=12496614 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
biopolymer transport protein ExbD/TolR
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_14086_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1655..1954)
DNA (300bp) protein (100aa)
protein tolQ n=1 Tax=Thiobacillus denitrificans RepID=UPI0003707686
MotA/TolQ/ExbB proton channel family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_14086_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1985..2347)
DNA (363bp) protein (121aa)
MotA/TolQ/ExbB proton channel family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SET2_THIDA
MotA/TolQ/ExbB proton channel family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_14086_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2344..2775)
DNA (432bp) protein (144aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SET1_THIDA
4-hydroxybenzoyl-CoA thioesterase
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:AAZ98163.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_07252018_0_1um_scaffold_14086_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2778..3305)
DNA (528bp) protein (176aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction DNA helicase RuvB n=1 Tax=Thiobacillus denitrificans RepID=UPI000360A38E
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_14086_8
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3367..3648
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2J9_9RHIZ
Uncharacterised protein {ECO:0000313|EMBL:CRE24067.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
RTP_07252018_0_1um_scaffold_14086_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3753..5252)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374B469
diguanylate cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_14086_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5254..5544)
DNA (291bp) protein (97aa)
Holliday junction DNA helicase RuvA n=1 Tax=Thiobacillus denitrificans RepID=UPI000378BE3C
DNA recombination protein, RuvA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 10 items

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