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RTP_07252018_0_1um_scaffold_4720_3

Organism: RTP_07252018_0_1um_Hydrogenophilales_62_9

near complete RP 46 / 55 MC: 5 BSCG 44 / 51 MC: 3 ASCG 13 / 38 MC: 5
Location: comp(1637..2539)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 interacting domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL37_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 229.0
  • Bit_score: 337
  • Evalue 1.30e-89
Sigma 54 interacting domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 229.0
  • Bit_score: 337
  • Evalue 3.70e-90
Sigma 54 interacting domain protein {ECO:0000313|EMBL:ACS21188.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 229.0
  • Bit_score: 337
  • Evalue 1.80e-89

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGAAAAAAAATCATTTCTTCGCCCTGAGCCTGATCGCTGTGGCCGTCATGGCTGGCTGCAGCACGATGCCCCAAAGCACGACGCTGGATAATGCCCGCGTGGACTACAGCAAGGCACAGGCCAACCCGCAAGTCGTCACGCTCGCGCCCCTACAGCTCAAGGATGCGGGTGAGGCGCTCGACCGTGCCAATGCCGCCCAGACTTCGCGTGAAGATGCTGAGGTGGTAGAAAGCCTGGCCGACACCTTCGAAAAAGACCAGGTATCCCTGTTTGACTCGCCCCGCCTGGGCGAGGCCCACCGCGACACCGCGCACGAGATACGTAAGCTGCTGTTGGCCAACGACCAAGGTGCCTCTGAGCGGGCACTCAAAGAGCTGGCTGACTATCGCAACTATCGGCGCTACGACATCATCAGGCACAGCCCTGTGGGGCAGACCAGGCTGTCCACTTGGGGAACAGGTTCCGGCGGTGAGCTGGAGACGCCGTTCTATGTCGTTCGATCGGCCGTGCTGGCGCACGCCCTTGGGCATTTTGGCCGCGAACGCCAAGGTGCACCCGCATTGCGCCTCATGCTGTCAGACGAAGCTTTCTCGAAAATGGACGAGTCACGCTCACGCAATGTGTTGCAGTTCCTGTCAGGCACATTGGGCTTACAGCTGATTATGGCCATGCCCACCTCGAAGTCCGGCGCGGTCAAGCCCGAGTTTGACAAAGAGTTCACGTTCTCTAAGGTGCTGGCCTCGCGTGATGGCAAAGAATTGTTCGTCAGCGAGGTTCAGGAGAAAACGCTCAAACGAGATGCCTTGAGCACACTGTGGCGACACCATGCGGAGCAGGCCCGTGCAGCAGCCAAACGAGACTACCTGGCTGCGCAATCAGGTACGGAGGCACCTGATGCCTGA
PROTEIN sequence
Length: 301
MKKNHFFALSLIAVAVMAGCSTMPQSTTLDNARVDYSKAQANPQVVTLAPLQLKDAGEALDRANAAQTSREDAEVVESLADTFEKDQVSLFDSPRLGEAHRDTAHEIRKLLLANDQGASERALKELADYRNYRRYDIIRHSPVGQTRLSTWGTGSGGELETPFYVVRSAVLAHALGHFGRERQGAPALRLMLSDEAFSKMDESRSRNVLQFLSGTLGLQLIMAMPTSKSGAVKPEFDKEFTFSKVLASRDGKELFVSEVQEKTLKRDALSTLWRHHAEQARAAAKRDYLAAQSGTEAPDA*