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RTP_07252018_0_1um_scaffold_4720

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_07252018_0_1um_scaffold_4720_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..172
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWM6_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL97413.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
RTP_07252018_0_1um_scaffold_4720_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(484..1644)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI000237656B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS21187.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
RTP_07252018_0_1um_scaffold_4720_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1637..2539)
DNA (903bp) protein (301aa)
Sigma 54 interacting domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL37_VARPS
Sigma 54 interacting domain-containing protein
Sigma 54 interacting domain protein {ECO:0000313|EMBL:ACS21188.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
RTP_07252018_0_1um_scaffold_4720_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2557..2958)
DNA (402bp) protein (134aa)
Chromosome segregation ATPase n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EXI8_PSEST
chromosome partitioning protein ParA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_4720_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3100..3327
DNA (228bp) protein (76aa)
hydrogenase expression protein HypE n=1 Tax=Thiobacillus thioparus RepID=UPI00037B8CF0
hydrogenase expression/formation protein HypE
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_4720_6
unknown

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4176..4298
DNA (123bp) protein (41aa)

This feature has no annotations

RTP_07252018_0_1um_scaffold_4720_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4716..5021
DNA (306bp) protein (102aa)
Sulfide dehydrogenase, cytochrome subunit id=5080632 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_4720_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5037..6344
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000370F429
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_07252018_0_1um_scaffold_4720_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6591..6878)
DNA (288bp) protein (96aa)
LysR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000375E498
cbbR1; transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 9 items

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