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RTP_07252018_0_1um_Hydrogenophilales_62_9

RTP_07252018_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: RTP_07252018_0_1um  |  SOB_across_mines  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 551-600 of 614 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RTP_07252018_0_1um_scaffold_39307
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1654 bp 63.85 4.72 100.48
RTP_07252018_0_1um_scaffold_46393
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1467 bp 64.49 4.70 98.98
RTP_07252018_0_1um_scaffold_41267
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1597 bp 61.62 4.70 95.24
RTP_07252018_0_1um_scaffold_44871
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1503 bp 65.14 4.69 99.20
RTP_07252018_0_1um_scaffold_55518
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1283 bp 65.86 4.68 99.84
RTP_07252018_0_1um_scaffold_34623
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 3408 bp 60.04 4.67 88.47
RTP_07252018_0_1um_scaffold_37753
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1702 bp 60.75 4.67 96.42
RTP_07252018_0_1um_scaffold_37803
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1701 bp 60.67 4.67 55.56
RTP_07252018_0_1um_scaffold_53232
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1324 bp 59.82 4.65 87.01
RTP_07252018_0_1um_scaffold_45679
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1483 bp 61.77 4.65 89.62
RTP_07252018_0_1um_scaffold_67625
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1101 bp 64.67 4.63 100.00
RTP_07252018_0_1um_scaffold_52687
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2502 bp 63.71 4.62 88.97
RTP_07252018_0_1um_scaffold_67283
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1105 bp 60.81 4.62 98.55
RTP_07252018_0_1um_scaffold_49690
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1395 bp 65.59 4.62 95.05
RTP_07252018_0_1um_scaffold_62187
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1176 bp 54.59 4.59 98.47
RTP_07252018_0_1um_scaffold_29444
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2025 bp 62.32 4.59 93.19
RTP_07252018_0_1um_scaffold_61881
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1180 bp 55.59 4.58 70.68
RTP_07252018_0_1um_scaffold_51898
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1350 bp 55.85 4.56 87.78
RTP_07252018_0_1um_scaffold_65904
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1123 bp 60.37 4.54 99.91
RTP_07252018_0_1um_scaffold_32344
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1896 bp 66.56 4.51 86.87
RTP_07252018_0_1um_scaffold_73436
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1030 bp 58.25 4.51 99.61
RTP_07252018_0_1um_scaffold_58202
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1237 bp 66.29 4.49 99.92
RTP_07252018_0_1um_scaffold_62415
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1173 bp 60.27 4.48 101.02
RTP_07252018_0_1um_scaffold_72723
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1039 bp 57.56 4.48 99.90
RTP_07252018_0_1um_scaffold_64839
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 1745 bp 57.13 4.47 95.59
RTP_07252018_0_1um_scaffold_54085
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1308 bp 63.23 4.47 99.08
RTP_07252018_0_1um_scaffold_64266
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1146 bp 62.83 4.45 99.48
RTP_07252018_0_1um_scaffold_44325
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1517 bp 53.99 4.45 57.35
RTP_07252018_0_1um_scaffold_36709
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1736 bp 65.26 4.41 99.54
RTP_07252018_0_1um_scaffold_56502
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1266 bp 65.48 4.38 98.34
RTP_07252018_0_1um_scaffold_58394
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1234 bp 63.13 4.38 97.49
RTP_07252018_0_1um_scaffold_56235
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1271 bp 67.82 4.37 95.59
RTP_07252018_0_1um_scaffold_45819
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1480 bp 58.18 4.36 72.97
RTP_07252018_0_1um_scaffold_17031
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2926 bp 56.32 4.36 93.71
RTP_07252018_0_1um_scaffold_12874
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 3519 bp 61.52 4.31 79.28
RTP_07252018_0_1um_scaffold_54339
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1303 bp 58.71 4.26 96.93
RTP_07252018_0_1um_scaffold_48730
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1416 bp 62.50 4.24 99.79
RTP_07252018_0_1um_scaffold_51618
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1355 bp 62.51 4.21 96.09
RTP_07252018_0_1um_scaffold_13128
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (80%)
5 3476 bp 64.24 4.19 100.03
RTP_07252018_0_1um_scaffold_66326
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1118 bp 67.62 4.16 63.60
RTP_07252018_0_1um_scaffold_60436
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1202 bp 67.05 4.12 85.11
RTP_07252018_0_1um_scaffold_60453
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1202 bp 65.64 4.12 100.33
RTP_07252018_0_1um_scaffold_46665
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1461 bp 64.34 4.11 94.25
RTP_07252018_0_1um_scaffold_68037
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1097 bp 62.35 4.10 99.82
RTP_07252018_0_1um_scaffold_32441
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1892 bp 61.42 4.04 101.00
RTP_07252018_0_1um_scaffold_75900
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1004 bp 62.75 4.03 95.62
RTP_07252018_0_1um_scaffold_63359
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1159 bp 61.52 4.01 79.98
RTP_07252018_0_1um_scaffold_40606
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2468 bp 62.56 4.01 70.02
RTP_07252018_0_1um_scaffold_75275
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1010 bp 65.15 4.01 99.80
RTP_07252018_0_1um_scaffold_14098
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 3319 bp 58.66 3.98 89.58
Displaying items 551-600 of 614 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.