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RTP_07252018_0_1um_Hydrogenophilales_62_9

RTP_07252018_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: RTP_07252018_0_1um  |  SOB_across_mines  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 301-350 of 614 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RTP_07252018_0_1um_scaffold_39177
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1659 bp 63.89 7.32 99.10
RTP_07252018_0_1um_scaffold_34115
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 1826 bp 64.68 7.31 92.83
RTP_07252018_0_1um_scaffold_4720
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (55.56%)
9 6880 bp 57.88 7.30 71.08
RTP_07252018_0_1um_scaffold_40325
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1625 bp 65.17 7.29 99.88
RTP_07252018_0_1um_scaffold_14332
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3283 bp 67.71 7.26 100.34
RTP_07252018_0_1um_scaffold_27300
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2134 bp 63.07 7.24 94.47
RTP_07252018_0_1um_scaffold_19601
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2661 bp 62.76 7.22 94.36
RTP_07252018_0_1um_scaffold_8895
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 4490 bp 63.96 7.22 92.27
RTP_07252018_0_1um_scaffold_19969
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3792 bp 63.00 7.20 91.22
RTP_07252018_0_1um_scaffold_11413
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 3797 bp 58.23 7.19 94.57
RTP_07252018_0_1um_scaffold_28921
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2051 bp 57.68 7.17 96.39
RTP_07252018_0_1um_scaffold_20560
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 2579 bp 66.27 7.15 99.11
RTP_07252018_0_1um_scaffold_71675
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1051 bp 66.41 7.14 99.62
RTP_07252018_0_1um_scaffold_30552
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1974 bp 62.97 7.14 97.26
RTP_07252018_0_1um_scaffold_6409
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
6 5614 bp 63.64 7.13 95.17
RTP_07252018_0_1um_scaffold_51943
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1349 bp 61.90 7.12 98.52
RTP_07252018_0_1um_scaffold_93376
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1415 bp 54.13 7.10 30.53
RTP_07252018_0_1um_scaffold_24595
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2288 bp 63.24 7.08 98.47
RTP_07252018_0_1um_scaffold_24185
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2314 bp 65.08 7.07 98.27
RTP_07252018_0_1um_scaffold_26945
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 2153 bp 65.58 7.04 97.68
RTP_07252018_0_1um_scaffold_60970
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1194 bp 61.14 7.04 94.97
RTP_07252018_0_1um_scaffold_11337
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3814 bp 62.51 7.00 79.60
RTP_07252018_0_1um_scaffold_15562
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 3110 bp 64.37 6.99 96.95
RTP_07252018_0_1um_scaffold_31429
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1934 bp 64.63 6.98 95.40
RTP_07252018_0_1um_scaffold_61623
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1184 bp 59.29 6.97 67.06
RTP_07252018_0_1um_scaffold_27754
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2109 bp 60.93 6.97 79.94
RTP_07252018_0_1um_scaffold_32419
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1893 bp 65.03 6.97 99.21
RTP_07252018_0_1um_scaffold_23522
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 3534 bp 60.72 6.96 77.42
RTP_07252018_0_1um_scaffold_14635
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 3236 bp 61.77 6.95 71.01
RTP_07252018_0_1um_scaffold_14209
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 3302 bp 64.05 6.95 101.48
RTP_07252018_0_1um_scaffold_49285
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1404 bp 61.18 6.94 100.00
RTP_07252018_0_1um_scaffold_20557
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2579 bp 58.70 6.92 76.19
RTP_07252018_0_1um_scaffold_54325
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1303 bp 61.78 6.91 93.02
RTP_07252018_0_1um_scaffold_14031
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
4 3327 bp 66.37 6.90 91.43
RTP_07252018_0_1um_scaffold_11812
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3715 bp 58.60 6.90 90.44
RTP_07252018_0_1um_scaffold_27774
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2108 bp 60.01 6.90 97.49
RTP_07252018_0_1um_scaffold_38581
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1677 bp 65.89 6.89 99.28
RTP_07252018_0_1um_scaffold_49622
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1396 bp 64.40 6.88 89.18
RTP_07252018_0_1um_scaffold_72133
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1046 bp 62.14 6.88 86.90
RTP_07252018_0_1um_scaffold_20779
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2560 bp 59.49 6.86 95.16
RTP_07252018_0_1um_scaffold_53875
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1312 bp 66.69 6.86 99.92
RTP_07252018_0_1um_scaffold_71523
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1053 bp 62.20 6.84 100.00
RTP_07252018_0_1um_scaffold_56005
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1274 bp 62.48 6.83 99.84
RTP_07252018_0_1um_scaffold_54526
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1847 bp 62.75 6.82 92.58
RTP_07252018_0_1um_scaffold_58298
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1236 bp 64.72 6.80 100.24
RTP_07252018_0_1um_scaffold_19020
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2715 bp 63.20 6.80 77.57
RTP_07252018_0_1um_scaffold_11819
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (83.33%)
6 3714 bp 62.41 6.79 58.16
RTP_07252018_0_1um_scaffold_30190
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1991 bp 66.55 6.78 96.28
RTP_07252018_0_1um_scaffold_35503
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1776 bp 62.56 6.76 95.27
RTP_07252018_0_1um_scaffold_26527
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2177 bp 66.56 6.75 81.58
Displaying items 301-350 of 614 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.