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RTP_07252018_0_1um_Hydrogenophilales_62_9

RTP_07252018_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: RTP_07252018_0_1um  |  SOB_across_mines  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 351-400 of 614 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RTP_07252018_0_1um_scaffold_14127
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3314 bp 63.91 9.10 96.50
RTP_07252018_0_1um_scaffold_49234
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1405 bp 61.42 4.91 88.40
RTP_07252018_0_1um_scaffold_22719
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2413 bp 58.31 9.01 81.81
RTP_07252018_0_1um_scaffold_30996
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1954 bp 66.07 5.68 100.26
RTP_07252018_0_1um_scaffold_29420
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2026 bp 62.49 5.85 81.59
RTP_07252018_0_1um_scaffold_23184
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2382 bp 57.77 4.79 97.98
RTP_07252018_0_1um_scaffold_61517
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1186 bp 65.68 7.34 91.06
RTP_07252018_0_1um_scaffold_14677
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3232 bp 60.12 8.59 96.72
RTP_07252018_0_1um_scaffold_21847
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 4437 bp 60.85 5.44 66.19
RTP_07252018_0_1um_scaffold_59930
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1210 bp 63.55 4.83 100.66
RTP_07252018_0_1um_scaffold_28410
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2077 bp 65.86 9.24 98.80
RTP_07252018_0_1um_scaffold_23970
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2327 bp 67.60 5.99 100.04
RTP_07252018_0_1um_scaffold_21083
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2536 bp 62.58 6.15 89.43
RTP_07252018_0_1um_scaffold_73436
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1030 bp 58.25 4.51 99.61
RTP_07252018_0_1um_scaffold_40726
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1613 bp 63.42 7.53 93.55
RTP_07252018_0_1um_scaffold_41320
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1596 bp 53.82 6.30 65.23
RTP_07252018_0_1um_scaffold_28423
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2076 bp 67.63 5.13 86.42
RTP_07252018_0_1um_scaffold_15052
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3181 bp 65.95 15.37 99.78
RTP_07252018_0_1um_scaffold_23478
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2363 bp 61.24 9.01 82.90
RTP_07252018_0_1um_scaffold_35182
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1787 bp 64.35 7.81 100.56
RTP_07252018_0_1um_scaffold_76675
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1838 bp 59.85 6.04 94.18
RTP_07252018_0_1um_scaffold_46730
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1459 bp 65.25 5.96 93.76
RTP_07252018_0_1um_scaffold_24006
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2325 bp 63.44 5.16 96.39
RTP_07252018_0_1um_scaffold_8545
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 4613 bp 64.04 7.77 88.58
RTP_07252018_0_1um_scaffold_29993
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2000 bp 56.60 5.40 64.05
RTP_07252018_0_1um_scaffold_56235
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1271 bp 67.82 4.37 95.59
RTP_07252018_0_1um_scaffold_61051
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1192 bp 62.42 5.91 96.14
RTP_07252018_0_1um_scaffold_62755
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1167 bp 59.81 5.14 76.09
RTP_07252018_0_1um_scaffold_16308
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 3012 bp 64.54 6.13 99.10
RTP_07252018_0_1um_scaffold_67455
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1103 bp 63.74 7.75 94.92
RTP_07252018_0_1um_scaffold_26943
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 4098 bp 65.71 8.53 90.19
RTP_07252018_0_1um_scaffold_27392
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2128 bp 63.86 8.60 99.81
RTP_07252018_0_1um_scaffold_32441
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1892 bp 61.42 4.04 101.00
RTP_07252018_0_1um_scaffold_35977
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1761 bp 56.96 6.30 95.91
RTP_07252018_0_1um_scaffold_25674
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2226 bp 57.50 11.66 75.07
RTP_07252018_0_1um_scaffold_64266
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1146 bp 62.83 4.45 99.48
RTP_07252018_0_1um_scaffold_36842
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1732 bp 66.28 5.89 96.30
RTP_07252018_0_1um_scaffold_37684
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1704 bp 65.85 5.37 100.00
RTP_07252018_0_1um_scaffold_33630
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1845 bp 67.10 7.40 99.67
RTP_07252018_0_1um_scaffold_56502
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1266 bp 65.48 4.38 98.34
RTP_07252018_0_1um_scaffold_51618
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1355 bp 62.51 4.21 96.09
RTP_07252018_0_1um_scaffold_64789
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1139 bp 62.60 10.27 91.66
RTP_07252018_0_1um_scaffold_22816
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2406 bp 64.34 5.80 96.51
RTP_07252018_0_1um_scaffold_64026
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1149 bp 70.84 5.74 100.26
RTP_07252018_0_1um_scaffold_39002
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1664 bp 59.62 7.39 77.52
RTP_07252018_0_1um_scaffold_42539
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1562 bp 65.36 5.76 99.68
RTP_07252018_0_1um_scaffold_56005
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1274 bp 62.48 6.83 99.84
RTP_07252018_0_1um_scaffold_38758
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1671 bp 60.86 6.10 62.30
RTP_07252018_0_1um_scaffold_31728
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1922 bp 65.30 10.61 95.21
RTP_07252018_0_1um_scaffold_56525
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1266 bp 54.66 6.16 60.90
Displaying items 351-400 of 614 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.