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RTP_07252018_0_1um_Hydrogenophilales_62_9

RTP_07252018_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: RTP_07252018_0_1um  |  SOB_across_mines  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 401-450 of 614 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RTP_07252018_0_1um_scaffold_71953
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1048 bp 63.17 5.73 100.76
RTP_07252018_0_1um_scaffold_51898
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1350 bp 55.85 4.56 87.78
RTP_07252018_0_1um_scaffold_53595
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1317 bp 53.76 2.16 95.90
RTP_07252018_0_1um_scaffold_13126
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 3477 bp 63.53 9.06 88.18
RTP_07252018_0_1um_scaffold_70911
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1060 bp 63.21 3.82 85.19
RTP_07252018_0_1um_scaffold_35503
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1776 bp 62.56 6.76 95.27
RTP_07252018_0_1um_scaffold_61352
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1188 bp 67.00 6.44 92.42
RTP_07252018_0_1um_scaffold_21428
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2509 bp 67.56 5.74 100.08
RTP_07252018_0_1um_scaffold_60895
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1195 bp 63.35 5.65 88.62
RTP_07252018_0_1um_scaffold_14777
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 3217 bp 60.74 7.97 75.72
RTP_07252018_0_1um_scaffold_27186
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2141 bp 57.78 5.18 82.39
RTP_07252018_0_1um_scaffold_37477
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1710 bp 64.68 6.23 100.18
RTP_07252018_0_1um_scaffold_53102
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1326 bp 61.16 4.98 95.93
RTP_07252018_0_1um_scaffold_35262
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1785 bp 62.46 6.47 99.50
RTP_07252018_0_1um_scaffold_61623
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1184 bp 59.29 6.97 67.06
RTP_07252018_0_1um_scaffold_61881
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1180 bp 55.59 4.58 70.68
RTP_07252018_0_1um_scaffold_70678
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1063 bp 65.29 5.36 70.27
RTP_07252018_0_1um_scaffold_49895
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1390 bp 58.42 6.69 93.24
RTP_07252018_0_1um_scaffold_42584
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1560 bp 62.56 8.75 99.62
RTP_07252018_0_1um_scaffold_35530
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1775 bp 65.63 6.08 79.94
RTP_07252018_0_1um_scaffold_24595
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2288 bp 63.24 7.08 98.47
RTP_07252018_0_1um_scaffold_39307
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1654 bp 63.85 4.72 100.48
RTP_07252018_0_1um_scaffold_59788
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1212 bp 63.28 5.20 96.53
RTP_07252018_0_1um_scaffold_20852
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2553 bp 65.14 6.05 90.60
RTP_07252018_0_1um_scaffold_72598
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1040 bp 57.69 7.79 58.27
RTP_07252018_0_1um_scaffold_67784
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1099 bp 61.06 9.83 73.43
RTP_07252018_0_1um_scaffold_93376
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1415 bp 54.13 7.10 30.53
RTP_07252018_0_1um_scaffold_30889
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1959 bp 61.66 5.05 82.54
RTP_07252018_0_1um_scaffold_36915
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1729 bp 61.19 7.55 100.12
RTP_07252018_0_1um_scaffold_51172
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1364 bp 61.29 5.61 74.56
RTP_07252018_0_1um_scaffold_42598
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1560 bp 58.97 5.67 77.88
RTP_07252018_0_1um_scaffold_51943
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1349 bp 61.90 7.12 98.52
RTP_07252018_0_1um_scaffold_23840
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2337 bp 59.18 4.94 95.38
RTP_07252018_0_1um_scaffold_32520
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1889 bp 59.56 5.64 80.36
RTP_07252018_0_1um_scaffold_56321
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1269 bp 63.91 10.05 94.33
RTP_07252018_0_1um_scaffold_50018
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1388 bp 63.90 5.51 95.10
RTP_07252018_0_1um_scaffold_58298
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1236 bp 64.72 6.80 100.24
RTP_07252018_0_1um_scaffold_28282
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2084 bp 67.37 6.41 96.16
RTP_07252018_0_1um_scaffold_20866
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 2552 bp 65.32 5.47 98.86
RTP_07252018_0_1um_scaffold_67283
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1105 bp 60.81 4.62 98.55
RTP_07252018_0_1um_scaffold_58815
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1227 bp 58.92 5.38 94.13
RTP_07252018_0_1um_scaffold_55417
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1284 bp 59.74 5.96 98.83
RTP_07252018_0_1um_scaffold_24626
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2287 bp 64.58 7.80 99.56
RTP_07252018_0_1um_scaffold_32794
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1877 bp 58.92 8.55 81.19
RTP_07252018_0_1um_scaffold_45555
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1486 bp 59.83 6.46 100.13
RTP_07252018_0_1um_scaffold_41715
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1585 bp 53.94 6.06 88.20
RTP_07252018_0_1um_scaffold_60436
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1202 bp 67.05 4.12 85.11
RTP_07252018_0_1um_scaffold_20117
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2615 bp 63.02 8.95 96.02
RTP_07252018_0_1um_scaffold_50039
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1387 bp 59.19 3.57 97.33
RTP_07252018_0_1um_scaffold_23356
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2370 bp 66.58 5.06 87.22
Displaying items 401-450 of 614 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.