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RTP_082018_0_1um_scaffold_2369

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_2369_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

69..635
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D8A3A
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

640..1746
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382647B
peptidase S1 and S6 chymotrypsin/Hap
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1824..2723)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003774591
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2781..3710
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371E361
1-aminocyclopropane-1-carboxylate deaminase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3721..4149
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F58A1
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4146..4874)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374145B
Octanoyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4903..5940
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366D734
ribosomal large subunit pseudouridine synthase D
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6034..7728
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B3860
peptidase S8 and S53 subtilisin kexin sedolisin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

7731..8240
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361507F
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8318..8890)
DNA (573bp) protein (191aa)
YceI family protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EID5_RUNSL
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8993..9931
DNA (939bp) protein (313aa)
malate--CoA ligase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI0003805D68
succinyl-CoA ligase subunit beta
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9989..10624)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CDC2C
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10611..11018)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364B0CD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11029..11424)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BDD59
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11499..14276
DNA (2778bp) protein (926aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EBD26
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14307..16712
DNA (2406bp) protein (802aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D76AC
peptidoglycan glycosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16713..18314)
DNA (1602bp) protein (534aa)
UPF0747 protein Niako_2572 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS9_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18375..19625)
DNA (1251bp) protein (417aa)
FAD dependent oxidoreductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAN4_CHIPD
FAD dependent oxidoreductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19677..20939
DNA (1263bp) protein (421aa)
sterol desaturase n=1 Tax=Niabella aurantiaca RepID=UPI00037DB3BC
fatty acid hydroxylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21083..21367)
DNA (285bp) protein (95aa)
dCMP deaminase n=1 Tax=Niabella aurantiaca RepID=UPI0003638D04
CMP/dCMP deaminase zinc-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21373..22881)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372AFB6
signal peptidase I
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(22952..24103)
DNA (1152bp) protein (384aa)
Fis family transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI0003709D83
putative two component sigma-54 specific transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24128..26203)
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003679A32
TonB-dependent receptor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26262..27248)
DNA (987bp) protein (329aa)
pyruvate dehydrogenase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI000361BF63
pyruvate dehydrogenase subunit beta
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27359..30328)
DNA (2970bp) protein (990aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BC436
TonB-denpendent receptor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

30475..31404
DNA (930bp) protein (310aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6R3_NIAKG
phosphoribosylaminoimidazolesuccinocarboxamide synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(31410..32582)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BF5C7
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(32597..35050)
DNA (2454bp) protein (818aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6Q8_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(35130..35444)
DNA (315bp) protein (105aa)
Rhodanese-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPB3_NIAKG
rhodanese-like protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_2369_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(35451..36269)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DD6D4
penicillin-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 43 in total

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