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RTP_082018_0_1um_scaffold_1233

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_1233_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(107..1459)
DNA (1353bp) protein (451aa)
Aldehyde dehydrogenase family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QLG4_9CYAN
NAD-dependent aldehyde dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1474..2052)
DNA (579bp) protein (193aa)
PhnA protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NV99_9SPHI
PhnA protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2124..2546)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E0309
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2603..5749
DNA (3147bp) protein (1049aa)
glycosyl hydrolase n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255B6E6
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5800..6735
DNA (936bp) protein (312aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQ69_EMTOG
alpha/beta hydrolase fold containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6882..8723)
DNA (1842bp) protein (614aa)
Signal transduction histidine kinase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SIZ6_9FLAO
putative two-component sensor protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8844..10160
DNA (1317bp) protein (439aa)
Peptidase M20 n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EXC8_EMTOG
peptidase M20
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10186..11430)
DNA (1245bp) protein (415aa)
Outer membrane protein/protective antigen OMA87 n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R551_OWEHD
outer membrane protein/protective antigen OMA87
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11484..12836
DNA (1353bp) protein (451aa)
Xaa-Pro aminopeptidase n=1 Tax=Spirosoma panaciterrae RepID=UPI000377867C
Xaa-Pro aminopeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12823..14106)
DNA (1284bp) protein (428aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SC26_PEDSD
major facilitator superfamily protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14159..15820)
DNA (1662bp) protein (554aa)
Amidase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QHN7_SPILD
amidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15882..16808
DNA (927bp) protein (309aa)
carbohydrate kinase n=1 Tax=Deinococcus apachensis RepID=UPI00037D8E22
PfkB protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16819..17736
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037091EE
pseudouridine-5'-phosphate glycosidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17766..18620)
DNA (855bp) protein (285aa)
Cyanophycinase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVN0_HALH1
cyanophycinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18653..19576)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZZ9_CYCMS
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19651..21630)
DNA (1980bp) protein (660aa)
acetyl-CoA synthetase n=1 Tax=Segetibacter koreensis RepID=UPI000373590A
acetate/CoA ligase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21705..22907
DNA (1203bp) protein (401aa)
Major facilitator superfamily MFS_1 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FK24_FLAJ1
major facilitator transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22918..23172
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5S5_9FLAO
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23275..23784
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TV61_MARTH
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23786..24244)
DNA (459bp) protein (153aa)
Hydrolase CocE/NonD family protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L596_HALH1
hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24220..25662)
DNA (1443bp) protein (481aa)
Hydrolase, CocE/NonD family n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZRS7_9BACT
putative hydrolase, CocE/NonD family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_22
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25757..27025)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J6B7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAZ94816.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
RTP_082018_0_1um_scaffold_1233_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27454..28476)
DNA (1023bp) protein (341aa)
Helix-turn-helix domain protein id=4388239 bin=GWF2_Bacteroidetes_40_14 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
XRE family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_24
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28473..28826)
DNA (354bp) protein (118aa)
Putative toxin-antitoxin system toxin component n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DN56_9BACE
Putative toxin-antitoxin system toxin component {ECO:0000313|EMBL:CDD91586.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
hypothetical protein
RTP_082018_0_1um_scaffold_1233_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

28930..29205
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000374B048
HigA family addiction module antidote protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1233_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29252..30184)
DNA (933bp) protein (311aa)
Primary replicative DNA helicase n=1 Tax=Niabella soli DSM 19437 RepID=H1NN47_9SPHI
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:AHF15369.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
RTP_082018_0_1um_scaffold_1233_27
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30209..31357)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VPA3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPR71766.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
putative membrane protein
RTP_082018_0_1um_scaffold_1233_28
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31407..32042)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J6X9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAZ94715.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
hypothetical protein
RTP_082018_0_1um_scaffold_1233_29
unknown

Not on your lists

comp(32114..32569)
DNA (456bp) protein (152aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_1233_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

32631..32975
DNA (345bp) protein (115aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 58 in total

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