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RTP_082018_0_1um_scaffold_1364

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_1364_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

76..2199
DNA (2124bp) protein (708aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003774FB4
DNA ligase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

2202..2873
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037565BF
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2894..3382)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000361AA58
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3416..4222)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TN49_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4244..5233)
DNA (990bp) protein (330aa)
aspartate-semialdehyde dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00037CA623
aspartate-semialdehyde dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5318..6241)
DNA (924bp) protein (308aa)
sugar kinase n=1 Tax=Segetibacter koreensis RepID=UPI000361A34E
PfkB domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6362..6979
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M2_NIAKG
TetR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6972..8045
DNA (1074bp) protein (358aa)
Phenylacetate-CoA oxygenase/reductase, PaaK subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M3_NIAKG
phenylacetate-CoA oxygenase/reductase subunit PaaK
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

8053..8997
DNA (945bp) protein (315aa)
phenylacetate-CoA oxygenase subunit PaaA n=1 Tax=Lewinella cohaerens RepID=UPI00035D2038
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9049..9417
DNA (369bp) protein (123aa)
Phenylacetate-CoA oxygenase, PaaH subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA59_NIAKG
phenylacetate-CoA oxygenase subunit PaaH
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

9426..10208
DNA (783bp) protein (261aa)
Phenylacetate-CoA oxygenase, PaaI subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA58_NIAKG
phenylacetate-CoA oxygenase subunit PaaI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10202..10690
DNA (489bp) protein (163aa)
Phenylacetate-CoA oxygenase, PaaJ subunit n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R5G0_OWEHD
phenylacetate-CoA oxygenase subunit PaaJ
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10700..11476
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA56_NIAKG
Enoyl-CoA hydratase/isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11494..11913
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036766D6
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11910..12503
DNA (594bp) protein (198aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA53_NIAKG
transferase hexapeptide repeat containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12545..13549
DNA (1005bp) protein (335aa)
GTPase CgtA n=1 Tax=Segetibacter koreensis RepID=UPI0003825C4B
GTPase CgtA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13708..14130
DNA (423bp) protein (141aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14200..15894)
DNA (1695bp) protein (565aa)
GTP-binding protein TypA n=1 Tax=Segetibacter koreensis RepID=UPI000361BF38
GTP-binding protein TypA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15969..16340
DNA (372bp) protein (124aa)
Membrane protein-like protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TQS4_MARTH
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16350..17357
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGC0_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17417..18466
DNA (1050bp) protein (350aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-ACP synthase n=1 Tax=Pedobacter agri RepID=UPI00029A6576
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18488..19396
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371E182
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19411..21633)
DNA (2223bp) protein (741aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGB3_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(21681..22742)
DNA (1062bp) protein (354aa)
Heme A synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGB2_NIAKG
Heme A synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22822..23421
DNA (600bp) protein (200aa)
RNase HII (EC:3.1.26.4)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A233F
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23418..24032)
DNA (615bp) protein (205aa)
translation factor Sua5 n=1 Tax=Segetibacter koreensis RepID=UPI0003709EE8
Sua5/YciO/YrdC/YwlC family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24307..24960
DNA (654bp) protein (218aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP8_NIAKG
two component transcriptional regulator, LuxR family
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24963..26003)
DNA (1041bp) protein (347aa)
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Segetibacter koreensis RepID=UPI00037F63CD
2-oxoglutarate synthase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26007..26402)
DNA (396bp) protein (132aa)
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMI6_CHIPD
alkylhydroperoxidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1364_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26436..28586
DNA (2151bp) protein (717aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG98_NIAKG
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 90 in total

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