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RTP_082018_0_1um_scaffold_1740

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_1740_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(218..748)
DNA (531bp) protein (177aa)
Heat shock protein DnaJ domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y7R1_9SPHI
heat shock protein DnaJ domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

777..1448
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003688E20
uracil-DNA glycosylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

1467..2204
DNA (738bp) protein (246aa)
glycerol acyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI0003634DCF
glycerol acyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2201..4843)
DNA (2643bp) protein (881aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037828E4
organic solvent tolerance protein OstA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5095..5820
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D44F6
cell wall hydrolase/autolysin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

5893..6900
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037961E5
Mammalian cell entry related domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6901..8547
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CE5D9
OstA family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8554..9732
DNA (1179bp) protein (393aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PH49_CHIPD
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Na+/H+ antiporter NhaA
RTP_082018_0_1um_scaffold_1740_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9737..10846)
DNA (1110bp) protein (370aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EK90_RUNSL
response regulator receiver sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10868..14152)
DNA (3285bp) protein (1095aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EK87_RUNSL
multi-sensor hybrid histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14346..16202
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380FF8D
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16243..16767
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002F11D50
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

16774..17565
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZTY3_9BACT
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17638..18870)
DNA (1233bp) protein (411aa)
Isocitrate dehydrogenase [NADP] n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM91_CHIPD
isocitrate dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18918..20819)
DNA (1902bp) protein (634aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003785165
Manganese transport protein mntH
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20809..21480)
DNA (672bp) protein (224aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH15_NIAKG
DtxR family iron (metal) dependent repressor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21575..22549
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C43CA
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22621..24273
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D21C4
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24356..24916
DNA (561bp) protein (187aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP9_NIAKG
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24967..26655)
DNA (1689bp) protein (563aa)
ATPase AAA-2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNQ5_NIAKG
ATPase AAA-2 domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26652..27461)
DNA (810bp) protein (270aa)
ATP-dependent Clp protease ClpC n=1 Tax=Segetibacter koreensis RepID=UPI00035CB38D
ATPase AAA-2 domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27549..27962
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003667690
sulfate transporter/antisigma-factor antagonist STAS
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27973..28614
DNA (642bp) protein (214aa)
Chaperone protein DnaJ n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVM5_CLOBO
chaperone protein DnaJ
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(28665..29363)
DNA (699bp) protein (233aa)
Cell wall anchor domain protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANY6_IGNAJ
cell wall anchor domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29398..30132)
DNA (735bp) protein (245aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(30156..31793)
DNA (1638bp) protein (546aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003670E81
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(31812..35732)
DNA (3921bp) protein (1307aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GMC6_9BACT
membrane receptor RagA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

35821..37749
DNA (1929bp) protein (643aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C8A20
DNA primase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(37855..39750)
DNA (1896bp) protein (632aa)
molecular chaperone DnaK n=1 Tax=Segetibacter koreensis RepID=UPI000364C4CA
dnaK; molecular chaperone DnaK
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1740_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(39915..40337)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003727887
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 74 in total

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