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RTP_082018_0_1um_scaffold_1745

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_1745_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3..440
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371AAA1
Enoyl-CoA hydratase/isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(437..1819)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035FF891
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1822..3186)
DNA (1365bp) protein (455aa)
Secretion protein HlyD family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1B4_DYAFD
secretion protein HlyD family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(3176..4897)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B510B
ABC transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5006..5638)
DNA (633bp) protein (211aa)
Carbonic anhydrase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIM8_NIAKG
carbonate dehydratase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5648..7198)
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036156C6
sulfate transporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7200..7955)
DNA (756bp) protein (252aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8U9_NIAKG
3-oxoacyl-(acyl-carrier-protein) reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7974..8567)
DNA (594bp) protein (198aa)
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V0_NIAKG
GH3 auxin-responsive promoter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8572..9201)
DNA (630bp) protein (210aa)
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V0_NIAKG
GH3 auxin-responsive promoter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9198..10025)
DNA (828bp) protein (276aa)
ABC transporter ATP-binding protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A42AA
sulfate-transporting ATPase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10100..10846
DNA (747bp) protein (249aa)
5,10-methylenetetrahydrofolate reductase n=1 Tax=Segetibacter koreensis RepID=UPI00036DA217
5,10-methylenetetrahydrofolate reductase (NAD(P))
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

10946..12934
DNA (1989bp) protein (663aa)
Two-component system sensor histidine kinase/response n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FQV5_9FLAO
multi-sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12942..13715)
DNA (774bp) protein (258aa)
Two-component system sensor histidine kinase/response regulator, hybrid, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZGA7_9BACT
histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13725..14801)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI000361B526
hybrid two-component sensor histidine kinase/response regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(14801..16702)
DNA (1902bp) protein (634aa)
Multi-sensor Signal Transduction Histidine Kinase n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J4H5_9FLAO
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16709..17107)
DNA (399bp) protein (133aa)
Signal transduction histidine kinase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QT31_SPHPG
GAF sensor hybrid histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(17124..17771)
DNA (648bp) protein (216aa)
LuxR family transcriptional regulator n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI000364F47A
LuxR family transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_18
unknown

Not on your lists

comp(18002..18217)
DNA (216bp) protein (72aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_1745_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(18282..19721)
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360ABAD
alkyl hydroperoxide reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19789..21219
DNA (1431bp) protein (477aa)
RNA methyltransferase, TrmA family n=1 Tax=Niabella soli DSM 19437 RepID=H1NT09_9SPHI
RNA methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21216..22058
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377A085
rhomboid family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22060..22983
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377492C
rhomboid family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22983..24104
DNA (1122bp) protein (374aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7N8_NIAKG
endonuclease/exonuclease/phosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24124..25227
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379F698
endonuclease/exonuclease/phosphatase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25245..26750
DNA (1506bp) protein (502aa)
cysteinyl-tRNA synthetase n=1 Tax=Segetibacter koreensis RepID=UPI00036ED076
cysteinyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26752..28941)
DNA (2190bp) protein (730aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037698BC
glutaryl-7-aminocephalosporanic-acid acylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29015..29929)
DNA (915bp) protein (305aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQC1_EMTOG
Xylose isomerase domain-containing protein TIM barrel
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

29971..30444
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCK9_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(30445..31446)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7M4_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1745_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(31794..32375)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000375B076
cytochrome C
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 39 in total

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