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RTP_082018_0_1um_scaffold_1837

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_1837_trna_2
unknown

Not on your lists

comp(3223..3296)
DNA (74bp)
transferRNA Ala
RTP_082018_0_1um_scaffold_1837_trna_1
unknown

Not on your lists

comp(3387..3460)
DNA (74bp)
transferRNA Ile
RTP_082018_0_1um_scaffold_1837_16S_1
unknown

Not on your lists

comp(3547..5073)
DNA (1527bp)
16S ribosomal RNA (16S rRNA)
RTP_082018_0_1um_scaffold_1837_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5422..6153)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D7969
tRNA pseudouridine synthase A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(6158..6646)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364C960
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

6688..9117
DNA (2430bp) protein (810aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB30_NIAKG
Peptidase M1 membrane alanine aminopeptidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9163..9960)
DNA (798bp) protein (266aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9972..10766)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB32_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10767..11228)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000366021B
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11238..11828)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382478E
LemA family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11964..12836
DNA (873bp) protein (291aa)
succinyl-CoA synthetase subsunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00035D2D0D
succinyl-CoA synthetase subunit alpha
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

12941..18826
DNA (5886bp) protein (1962aa)
Alpha-2-macroglobulin domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJA0_9SPHI
alpha-2-macroglobulin
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18831..19883
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B5E72
FAD dependent oxidoreductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19926..20336
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKG3_CHIPD
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20333..20824)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECI1_RUNSL
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20834..23701)
DNA (2868bp) protein (956aa)
excinuclease ABC subunit A n=1 Tax=Segetibacter koreensis RepID=UPI000380332E
excinuclease ABC subunit A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

24124..25311
DNA (1188bp) protein (396aa)
Cystathionine gamma-lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK86_NIAKG
cystathionine gamma-lyase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25341..26597
DNA (1257bp) protein (419aa)
Homoserine dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK84_NIAKG
homoserine dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26609..27229
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036CA069
phosphoesterase PA-phosphatase-like protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1837_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27406..27993)
DNA (588bp) protein (196aa)
aminopeptidase n=1 Tax=Pedobacter agri RepID=UPI00029A516B
peptidase M28
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 20 items

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