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RTP_082018_0_1um_scaffold_1922

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_1922_1
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(80..1324)
DNA (1245bp) protein (415aa)
Citrate (Si)-synthase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2N2_OWEHD
citrate (Si)-synthase
Tax=CG_Deferri_01
RTP_082018_0_1um_scaffold_1922_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1387..2445)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003758426
YjgP/YjgQ family permease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2646..3785)
DNA (1140bp) protein (380aa)
queuine tRNA-ribosyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI00038181F7
tRNA-guanine transglycosylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3919..4947
DNA (1029bp) protein (343aa)
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH86_NIAKG
family 2 glycosyl transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

4917..5573
DNA (657bp) protein (219aa)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH87_NIAKG
16S rRNA m(7)G-527 methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_6
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5621..7483)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FB143
aminopeptidase N
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7538..8203)
DNA (666bp) protein (222aa)
16S rRNA methyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI000373772E
16S rRNA methyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8205..8453)
DNA (249bp) protein (83aa)
Phosphoribosylformylglycinamidine synthase, purS n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR89_CHIPD
phosphoribosylformylglycinamidine synthase subunit PurS
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(8450..9211)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376A33B
CDP-alcohol phosphatidyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9213..10502)
DNA (1290bp) protein (430aa)
Peptidase M24 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH95_NIAKG
peptidase M24
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(10546..11571)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CC70B
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11571..15239)
DNA (3669bp) protein (1223aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F76DF
PKD domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(15252..17432)
DNA (2181bp) protein (727aa)
ATP-dependent DNA helicase RecG n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCR7_NIAKG
ATP-dependent DNA helicase RecG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17452..18462
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382E4B0
tryptophanyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_15
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

18525..19160
DNA (636bp) protein (212aa)
deoxynucleoside kinase n=1 Tax=Niabella aurantiaca RepID=UPI00037071C9
deoxyadenosine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

19178..19540
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH61_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19626..21266)
DNA (1641bp) protein (547aa)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH96_NIAKG
phosphoenolpyruvate carboxykinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

21364..22656
DNA (1293bp) protein (431aa)
dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI000362F8B8
dehydrogenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

22680..23276
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D245F
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23257..23796)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003677546
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_21
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

23875..25329
DNA (1455bp) protein (485aa)
Na+/solute symporter n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PPX5_CHIPD
Na+/solute symporter
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25316..25954
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003773A1F
O-methyltransferase family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_23
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

25951..27021
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A6277
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_24
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27024..27218
DNA (195bp) protein (65aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Prevotella multiformis DSM 16608 RepID=F0F8W1_9BACT
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27299..27511
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362FF84
hypoxanthine phosphoribosyltransferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

27456..29249
DNA (1794bp) protein (598aa)
von Willebrand factor type A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIC4_NIAKG
von Willebrand factor type A
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(29292..30461)
DNA (1170bp) protein (390aa)
molecular chaperone DnaJ n=1 Tax=Segetibacter koreensis RepID=UPI00037F3AAD
chaperone protein dnaJ
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(30477..31139)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003827B0B
protein grpE
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
RTP_082018_0_1um_scaffold_1922_29
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

31140..31340
DNA (201bp) protein (67aa)
SAM-dependent methyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI00036170B8
RNA methylase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying 29 items

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