name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_082018_0_1um_scaffold_1001_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(130..651)
|
superoxide dismutase, Cu-Zn (EC:1.15.1.1)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360A4FA
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_082018_0_1um_scaffold_1001_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
917..1657
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003675BB7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_082018_0_1um_scaffold_1001_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1730..2854
|
methylase n=1 Tax=Thiobacillus thioparus RepID=UPI0003609FE6
putative methyltransferase, Methylase of polypeptide chain release factors
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_082018_0_1um_scaffold_1001_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2882..4072
|
S-adenosylmethionine synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E2BE9
S-adenosylmethionine synthase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_082018_0_1um_scaffold_1001_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4795..5805)
|
Nucleoside-diphosphate-sugar epimerase id=1304150 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nucleoside-diphosphate-sugar epimerase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_082018_0_1um_scaffold_1001_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5870..7234
|
3-deoxy-D-manno-octulosonic acid transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI000382BFEA
3-deoxy-D-manno-octulosonic-acid transferase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_082018_0_1um_scaffold_1001_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7271..8617)
|
Type I secretion outer membrane protein, TolC id=1304148 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
type I secretion outer membrane protein TolC
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_082018_0_1um_scaffold_1001_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8645..8962)
|
sulfurtransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000371B5D0
rhodanese-like protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_082018_0_1um_scaffold_1001_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8974..9627)
|
protein-L-isoaspartate O-methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036544BE
protein-L-isoaspartate o-methyltransferase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_082018_0_1um_scaffold_1001_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9860..11818
|
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short=HMP-P synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMP-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMPP synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Thiamine biosynthesis protein ThiC {ECO:0000255|HAMAP-Rule:MF_00089}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
phosphomethylpyrimidine synthase ThiC n=1 Tax=Thiobacillus thioparus RepID=UPI00036C6FEA
thiamine biosynthesis protein ThiC
|
|
RTP_082018_0_1um_scaffold_1001_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11840..13570
|
Putative diguanylate cyclase (GGDEF domain) id=1304144 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
diguanylate cyclase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_082018_0_1um_scaffold_1001_12
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13653..14486
|
undecaprenyl-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] id=12494245 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
undecaprenyl-diphosphatase (EC:3.6.1.27)
|
|
RTP_082018_0_1um_scaffold_1001_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14499..15032)
|
Two Component Transcriptional Regulator, Fis family id=1304141 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Fis family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_082018_0_1um_scaffold_1001_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15029..16324)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361B9D3
periplasmic sensor signal transduction histidine kinase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_082018_0_1um_scaffold_1001_15
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16356..18629)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003715CF6
TonB-dependent receptor
Tax=CG_Hydro_01
|
|
RTP_082018_0_1um_scaffold_1001_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18888..19340
|
Putative uncharacterized protein id=1304138 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_082018_0_1um_scaffold_1001_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19365..20123)
|
Putative uncharacterized protein id=1304137 bin=GWE1_T_denit_62_9 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_082018_0_1um_scaffold_1001_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20098..20949)
|
UPF0276 protein Nmul_A2550 id=1304136 bin=GWE1_T_denit_62_9 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_082018_0_1um_scaffold_1001_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20960..21349)
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037904C7
calcium-binding EF-hand
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_082018_0_1um_scaffold_1001_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21415..21672)
|
Putative uncharacterized protein id=1304134 bin=GWE1_T_denit_62_9 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_082018_0_1um_scaffold_1001_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21669..22235)
|
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C659D
RNA polymerase sigma factor
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_082018_0_1um_scaffold_1001_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22377..23261
|
N-acetylglutamate kinase (EC:2.7.2.8)
acetylglutamate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI000370A163
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_082018_0_1um_scaffold_1001_23
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23290..23745
|
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFI3_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98627.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_082018_0_1um_scaffold_1001_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23742..24572
|
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003795B73
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_082018_0_1um_scaffold_1001_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24729..25631
|
enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378245E
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_082018_0_1um_scaffold_1001_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25611..28133)
|
Periplasmic Sensor Hybrid Histidine Kinase id=1304126 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
periplasmic sensor hybrid histidine kinase
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_082018_0_1um_scaffold_1001_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28141..29205)
|
divalent ion tolerance protein CutA n=1 Tax=Thiobacillus denitrificans RepID=UPI000382CA14
metal dependent phosphohydrolase
Metal dependent phosphohydrolase, HD region {ECO:0000313|EMBL:AAZ98623.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
RTP_082018_0_1um_scaffold_1001_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29363..30115
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F604D
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_082018_0_1um_scaffold_1001_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30131..32116)
|
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AA359
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
RTP_082018_0_1um_scaffold_1001_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32157..33185
|
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
phosphoribosylaminoimidazole synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00037A20E3
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|