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RTP_082018_0_1um_scaffold_1449

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_082018_0_1um_scaffold_1449_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..773
DNA (771bp) protein (257aa)
20S proteasome subunits A and B; K07395 putative proteasome-type protease id=12498247 bin=THIO_MID species=Acidithiobacillus ferrivorans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
20S proteasome subunits A and B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1108..3456
DNA (2349bp) protein (783aa)
AAA domain-containig protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XHE5_VARPD
AAA domain-containig protein
AAA domain-containig protein {ECO:0000313|EMBL:AGU51754.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
RTP_082018_0_1um_scaffold_1449_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3709..5064
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T309_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61157.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
RTP_082018_0_1um_scaffold_1449_4
Pseudomonas sp. GM30, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5064..5786
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM30 RepID=J2XZ38_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EUB86975.1}; TaxID=1144328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM30.;"
HNH endonuclease
RTP_082018_0_1um_scaffold_1449_5
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5980..6393)
DNA (414bp) protein (138aa)
hemoprotein id=12498246 bin=THIO_MID species=Methyloversatilis sp. NVD genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hemoglobin-like protein (Hmp)
Hemoglobin-like protein (Hmp) {ECO:0000313|EMBL:BAN36069.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_082018_0_1um_scaffold_1449_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6794..7348)
DNA (555bp) protein (185aa)
Putative uncharacterized protein id=2706191 bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7367..7744)
DNA (378bp) protein (126aa)
Putative hyperosmotically inducible periplasmic protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MC04_PARUW
osmY; hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7843..8154)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EE155
dissimilatory sulfite reductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8471..8632)
DNA (162bp) protein (54aa)
Putative uncharacterized protein id=1352864 bin=GWE1_T_denit_62_9 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_1449_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8685..9194)
DNA (510bp) protein (170aa)
peptidyl-prolyl cis-trans isomerase n=1 Tax=Thiobacillus thioparus RepID=UPI00037145E0
peptidyl-prolyl cis-trans isomerase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_1449_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9209..9598)
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=1352862 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_082018_0_1um_scaffold_1449_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9678..11546)
DNA (1869bp) protein (623aa)
adenylylsulfate reductase subunit alpha (EC:1.8.99.2)
Adenylylsulfate reductase, alpha subunit n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGL5_THIDA
Adenylylsulfate reductase, alpha subunit {ECO:0000313|EMBL:AAZ98235.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_082018_0_1um_scaffold_1449_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11546..12028)
DNA (483bp) protein (161aa)
adenylylsulfate reductase subunit beta n=1 Tax=Thiobacillus thioparus RepID=UPI00037C0587
adenylylsulfate reductase subunit beta
Adenylylsulfate reductase, beta subunit {ECO:0000313|EMBL:AAZ98236.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_082018_0_1um_scaffold_1449_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12065..12913)
DNA (849bp) protein (283aa)
adenylylsulfate reductase n=1 Tax=Thiobacillus thioparus RepID=UPI0003745DB4
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_1449_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12967..13320)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000372843E
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13504..13827)
DNA (324bp) protein (108aa)
Uncharacterized protein id=1307789 bin=GWE1_T_denit_62_9 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_1449_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13830..14942)
DNA (1113bp) protein (371aa)
hypothetical protein id=12495526 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14939..15358)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003681A67
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_19
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15440..15745)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GNT9_CUPNN
Transcription initiation protein {ECO:0000313|EMBL:KDR42525.1}; Uncharacterized protein {ECO:0000313|EMBL:CDY73921.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
RTP_082018_0_1um_scaffold_1449_20
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15806..16291)
DNA (486bp) protein (162aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036869E6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY92104.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
RTP_082018_0_1um_scaffold_1449_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16308..16664)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035DFFB5
dehydrogenase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16715..17095)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D6DB7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17121..17552)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000373917C
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17856..19148)
DNA (1293bp) protein (431aa)
RNA polymerase sigma factor id=1307793 bin=GWE1_T_denit_62_9 species=unknown genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ECF subfamily RNA polymerase sigma-24 subunit
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_1449_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19145..19507)
DNA (363bp) protein (121aa)
Uncharacterized protein id=1307792 bin=GWE1_T_denit_62_9 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_1449_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19509..19910)
DNA (402bp) protein (134aa)
Glyoxalase id=1307791 bin=GWE1_T_denit_62_9 species=Serratia odorifera genus=Serratia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
extradiol dioxygenase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_082018_0_1um_scaffold_1449_27
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20267..23668
DNA (3402bp) protein (1134aa)
hypothetical protein id=12498229 bin=THIO_MID species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=THIO_MID organism_group=Betaproteobacteria
Transglutaminase-like protein {ECO:0000313|EMBL:BAP89958.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
transglutaminase-like protein
RTP_082018_0_1um_scaffold_1449_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23844..24548
DNA (705bp) protein (235aa)
Putative mobilization protein MobD n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCU9_METPP
mobilization protein MobD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_082018_0_1um_scaffold_1449_29
unknown

Not on your lists

24541..25287
DNA (747bp) protein (249aa)

This feature has no annotations

RTP_082018_0_1um_scaffold_1449_30
unknown

Not on your lists

comp(25345..25428)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 30 items

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