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RTP_092018_0_1um_scaffold_6566

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_092018_0_1um_scaffold_6566_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..146)
DNA (144bp) protein (48aa)
GTP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CD4FF
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6566_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252..1256)
DNA (1005bp) protein (335aa)
hydrogenase expression protein HypE n=1 Tax=Thiobacillus thioparus RepID=UPI00037B8CF0
hydrogenase expression/formation protein HypE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6566_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1266..3491)
DNA (2226bp) protein (742aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003644F34
hydrogenase maturation protein HypF
Hydrogenase maturation protein HypF {ECO:0000313|EMBL:AAZ97338.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_6566_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3484..4581)
DNA (1098bp) protein (366aa)
hydrogenase assembly protein HupF n=1 Tax=Thiobacillus thioparus RepID=UPI0003674329
hydrogenase expression/formation protein HypD
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:AAZ97337.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_6566_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4581..4856)
DNA (276bp) protein (92aa)
hydrogenase nickel incorporation protein HypB n=1 Tax=Thiobacillus thioparus RepID=UPI00037762BD
hydrogenase accessory protein HypB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_6566_6
unknown

Not on your lists

4939..5271
DNA (333bp) protein (111aa)

This feature has no annotations

RTP_092018_0_1um_scaffold_6566_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5290..5643)
DNA (354bp) protein (118aa)
hydrogenase expression/formation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF id=12493980 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hydrogenase expression/formation protein HypA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_6566_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5636..5866)
DNA (231bp) protein (77aa)
hydrogenase assembly protein HypC n=1 Tax=Thiobacillus thioparus RepID=UPI00037C578B
hydrogenase expression/formation protein HupF/HypC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_6566_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6017..6490
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D9BD3
peptidase M52, hydrogen uptake protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_6566_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6480..6890
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003650BE4
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6566_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7052..8014
DNA (963bp) protein (321aa)
Ni-Fe hydrogenase, small subunit (EC:1.12.99.6)
Ni/Fe hydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00035E548E
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_6566_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8289..8939
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00038292AB
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 12 items

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