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RTP_092018_0_1um_scaffold_8009

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_092018_0_1um_scaffold_8009_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..147
DNA (147bp) protein (49aa)
50S ribosomal protein L15 n=1 Tax=Thiobacillus thioparus RepID=UPI00037CAF86
50S ribosomal protein L15
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_8009_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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166..1479
DNA (1314bp) protein (438aa)
preprotein translocase subunit SecY n=1 Tax=Thiobacillus thioparus RepID=UPI00037717CB
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_8009_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1479..1697
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 1 n=2 Tax=Thiobacillus RepID=IF11_THIDA
infA; translation initiation factor IF-1
Translation initiation factor IF-1 1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_8009_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1741..1854
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Thiomonas RepID=D5X638_THIK1
50S ribosomal protein L36
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_8009_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1935..2291
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1 Tax=Thiobacillus thioparus RepID=UPI00036CCA68
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_8009_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2301..2693
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RS11_THIDA
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000255|HAMAP-Rule:MF_01310}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_8009_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2709..3338
DNA (630bp) protein (210aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=12495299 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rpsD; 30S ribosomal protein S4
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_8009_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3368..4348
DNA (981bp) protein (327aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI000360BD00
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_8009_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4432..4821
DNA (390bp) protein (130aa)
50S ribosomal protein L17 n=1 Tax=Thiobacillus thioparus RepID=UPI00036728B3
50S ribosomal protein L17
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_8009_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4980..5708
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368736D
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_092018_0_1um_scaffold_8009_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5727..6992)
DNA (1266bp) protein (422aa)
hydroxypyruvate reductase (EC:1.1.1.81)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BC87A
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_8009_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7181..7345)
DNA (165bp) protein (55aa)
pseudouridylate synthase (EC:4.2.1.70)
RNA pseudouridylate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F81E1
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 12 items

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