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RTP_092018_0_1um_scaffold_582

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_092018_0_1um_scaffold_582_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75..581
DNA (507bp) protein (169aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000369A6E0
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

583..990
DNA (408bp) protein (136aa)
hypothetical protein id=12493559 bin=THIO_HI species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1009..1920
DNA (912bp) protein (304aa)
hypothetical protein id=12493558 bin=THIO_HI species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
band 7 protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2049..3296
DNA (1248bp) protein (416aa)
Putative transmembrane protein id=1320296 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
transmembrane protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3280..4905
DNA (1626bp) protein (542aa)
Putative FAD-dependent dehydrogenase id=1320297 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
FAD-dependent dehydrogenase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_092018_0_1um_scaffold_582_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5300..5638
DNA (339bp) protein (113aa)
Arsenical resistance operon repressor id=1320301 bin=GWE1_T_denit_62_9 species=Collimonas fungivorans genus=Collimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ArsR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5635..6120
DNA (486bp) protein (162aa)
glyoxalase/bleomycin resistance protein/dioxygenase id=12498428 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6174..6599
DNA (426bp) protein (142aa)
Protein tyrosine phosphatase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEV3_THIDA
protein tyrosine phosphatase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6627..7124
DNA (498bp) protein (166aa)
Arsenate reductase (EC:1.20.4.1)
protein tyrosine phosphatase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037D3EA5
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7183..8274
DNA (1092bp) protein (364aa)
arsenic transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00036357D3
ACR3 family arsenite transporter
Putative arsenite transporter, ACR3 family {ECO:0000313|EMBL:AAZ97379.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_092018_0_1um_scaffold_582_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8391..8924
DNA (534bp) protein (178aa)
sigma-70 family RNA polymerase sigma factor id=12498535 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
sigma-70 family RNA polymerase sigma factor
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9007..10062
DNA (1056bp) protein (352aa)
permease; K07089 id=12498536 bin=THIO_MID species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
permease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10117..10419
DNA (303bp) protein (101aa)
thiol-disulfide isomerase id=12498539 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
thiol-disulfide isomerase and thioredoxins family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10458..11381
DNA (924bp) protein (308aa)
Rhodanese-like protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UFJ8_9GAMM
Rhodanese-like protein
Tax=CG_Hydro_01
RTP_092018_0_1um_scaffold_582_15
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11476..11892
DNA (417bp) protein (139aa)
redox protein, regulator of disulfide bond formation
redox protein, regulator of disulfide bond formation id=12498540 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:BAN36890.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_092018_0_1um_scaffold_582_16
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11896..12663
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6APM2_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36889.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_092018_0_1um_scaffold_582_17
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12737..13348
DNA (612bp) protein (204aa)
Formylmethanofuran dehydrogenase subunit E n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE29_9PROT
formylmethanofuran dehydrogenase subunit E
Formylmethanofuran dehydrogenase subunit E {ECO:0000313|EMBL:BAN36888.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_092018_0_1um_scaffold_582_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13353..13655
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABM9_9PROT
hypothetical protein
Tax=CG_Hydro_01
RTP_092018_0_1um_scaffold_582_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13639..14547
DNA (909bp) protein (303aa)
Cation diffusion facilitator family transporter n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B984_9PROT
cation diffusion facilitator family transporter
Tax=CG_Hydro_01
RTP_092018_0_1um_scaffold_582_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15334..16374
DNA (1041bp) protein (347aa)
methylase n=1 Tax=Thiobacillus thioparus RepID=UPI0003609FE6
putative methyltransferase, Methylase of polypeptide chain release factors
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16401..17585
DNA (1185bp) protein (395aa)
S-adenosylmethionine synthase id=12498683 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
S-adenosylmethionine synthase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17784..18026)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003763841
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18159..19160)
DNA (1002bp) protein (334aa)
molybdenum cofactor biosynthesis protein MoaA n=1 Tax=Thiobacillus thioparus RepID=UPI000379B6A7
GTP cyclohydrolase subunit MoaA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19240..19764
DNA (525bp) protein (175aa)
Molybdopterin-guanine dinucleotide biosynthesis MobB id=1324286 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
molybdopterin-guanine dinucleotide biosynthesis MobB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19739..20932
DNA (1194bp) protein (398aa)
molybdopterin molybdochelatase; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] id=12497335 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
molybdopterin molybdochelatase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20929..21180
DNA (252bp) protein (84aa)
Molybdopterin converting factor, subunit 1 id=1324284 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
molybdopterin synthase subunit MoaD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21185..21658
DNA (474bp) protein (158aa)
Molybdenum cofactor biosynthesis protein E n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK16_THIDA
molybdopterin synthase subunit MoaE
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21685..21915)
DNA (231bp) protein (77aa)
Addiction module toxin, Txe/YoeB family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JMK0_9GAMM
Txe/YoeB family addiction module toxin
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21945..22187)
DNA (243bp) protein (81aa)
Putative antitoxin of toxin-antitoxin stability system n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZB8_AROAE
antitoxin of toxin-antitoxin stability system
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_092018_0_1um_scaffold_582_30
unknown

Not on your lists

comp(22627..23259)
DNA (633bp) protein (211aa)

This feature has no annotations

Displaying items 1-30 of 115 in total

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