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RTP_092018_0_1um_scaffold_1184_37

Organism: RTP_092018_0_1um_Hydrogenophilales_62_10

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 27367..28101

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 245.0
  • Bit_score: 401
  • Evalue 1.30e-109
Pseudouridine synthase, Rsu id=1337017 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 244.0
  • Bit_score: 428
  • Evalue 3.50e-117
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 244.0
  • Bit_score: 446
  • Evalue 1.80e-122

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGACTGAACCCATCCGACTCTCCAAACTCATGTCCGAACGCGGCCTGTGCTCGCGCCGCGAAGCGGACAGCTACATCGAGCGCGGACTGGTGTTTGTCGACGGCAAACGCGTCAGCGAACTCGGCACCAAGATCGACCCCGACTGCGCAATCCGGCTCGACCGCGAGGCCAGCGCGCAGCAGCAACAGCGCGTCACCATCCTGCTGCACAAGCCGATCGGCTATGTGTCGGGCCAACCCGAGCCGGGTTATCAGCCGGCGGTGGTGCTGATCCGTCCGGAAACGCAATGGCAGGACGGCCACGCCGGGCCGGTTTTTTCGCGCGATCACCTCAAAGGCCTGGCACCCGCCGGGCGGCTCGACATTGATTCGACCGGACTCCTGGTGCTGACGCAGGACGGGCGCATTGCCAGGCAATTAATCGGCGAGGACTCCGAGGTCGAGAAGGAGTATCTGGTGCGGGTGGAAGGCGATCTGGATGATCGGGGTTTTGCGCTGCTCAATCACGGCCTGTCGCTGGATGGCAAAAAACTGCGTCCCGCCCGGGTGTTCTGGCAAAACGCCGACCAGCTGTGCTTCATTCTGAAGGAGGGCCGCAAGCGGCAGATTCGCCGCATGTGCGAACTGGTGGGATTGAATGTGGTGGGACTGAAGCGGGTGCGTATCGGTCAAGTGAGGCTGAGTGATTTACCTCTGGGGCAATGGCGCTATCTGCGCGCAGACGAGCAGTTCTAG
PROTEIN sequence
Length: 245
MTEPIRLSKLMSERGLCSRREADSYIERGLVFVDGKRVSELGTKIDPDCAIRLDREASAQQQQRVTILLHKPIGYVSGQPEPGYQPAVVLIRPETQWQDGHAGPVFSRDHLKGLAPAGRLDIDSTGLLVLTQDGRIARQLIGEDSEVEKEYLVRVEGDLDDRGFALLNHGLSLDGKKLRPARVFWQNADQLCFILKEGRKRQIRRMCELVGLNVVGLKRVRIGQVRLSDLPLGQWRYLRADEQF*