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RTP_09252017_14_scaffold_961

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_09252017_14_scaffold_961_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..252)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DDC51
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_09252017_14_scaffold_961_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(296..943)
DNA (648bp) protein (216aa)
Metallo-beta-lactamase superfamily protein id=1335197 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
metallo-beta-lactamase superfamily protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_961_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

960..1598
DNA (639bp) protein (213aa)
Putative uncharacterized protein id=1335198 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_961_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1706..2122
DNA (417bp) protein (139aa)
nucleoside diphosphate kinase regulator n=1 Tax=Thiobacillus thioparus RepID=UPI000371209E
GreA/GreB family elongation factor
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_961_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2135..3058
DNA (924bp) protein (308aa)
Membrane protein, putative id=1335201 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_961_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3063..4391
DNA (1329bp) protein (443aa)
Hypothetical membrane protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4X0_AZOSB
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_961_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4509..5177
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E2303
cytochrome C
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_961_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5247..5591)
DNA (345bp) protein (115aa)
Putative uncharacterized protein id=1335203 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_961_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5588..5989)
DNA (402bp) protein (134aa)
hypothetical protein; K09966 hypothetical protein id=12497682 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_961_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6045..7280)
DNA (1236bp) protein (412aa)
Lytic murein transglycosylase id=1335205 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
lytic murein transglycosylase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_961_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7273..9039)
DNA (1767bp) protein (589aa)
Asparagine synthetase id=1335206 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
asparagine synthase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_961_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9053..10033)
DNA (981bp) protein (327aa)
serine/threonine protein kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F1B05
serine/threonine protein kinase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_961_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10109..11911
DNA (1803bp) protein (601aa)
ribonucleoside-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=12495495 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ribonucleoside-diphosphate reductase subunit alpha
Ribonucleoside-diphosphate reductase alpha chain {ECO:0000313|EMBL:AAZ96011.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_09252017_14_scaffold_961_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11881..12843
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037802A0
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_961_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12855..13091)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035F32BC
endonuclease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_961_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13141..14490)
DNA (1350bp) protein (450aa)
Predicted signal transduction protein containing EAL and modified HD-GYP domains n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SMN4_THIDA
signal transduction protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_09252017_14_scaffold_961_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14678..15319
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365AA5A
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:AAZ96007.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_09252017_14_scaffold_961_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15336..16301
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381AA85
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_961_19
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

16429..17091
DNA (663bp) protein (221aa)
Secreted protein id=1780787 bin=GWD2_Nitrospirae-related_57_8 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=GWC2_Nitrospirae_57_13_curated
RTP_09252017_14_scaffold_961_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17157..17696)
DNA (540bp) protein (180aa)
Glycine cleavage system transcriptional repressor id=1333111 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
glycine cleavage system transcriptional repressor
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_961_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17696..18115)
DNA (420bp) protein (140aa)
Membrane protein, putative id=1333110 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 21 items

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